Gene PHATRDRAFT_29011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29011 
Symbol 
ID7202914 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp703203 
End bp704315 
Gene Length1113 bp 
Protein Length170 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182119 
Protein GI219123617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00069003 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCACAAGCAC GCTAACGCAA GGACTACTAT CCCAAGGATA AGGTGTGTGC GAAGGTATGC 
TACAAAGTGT ATCTAAGACT CTAGATTTGG ATGGAGCTTC CTTGTATGAA CAACAGAGTG
GTGCCTCCAG TGTACTGTCA GCAAGTCCGC TTCGTTTTGG CGAAACAGGA CTGAAAGTGA
ACGCGTTGAT GACGGCTCGA AACCTCGTGA AGAAAAATCC ACCGTCGTGA CTCCGTCGCA
AGCAGCAATC TCACCATTTT TTCTCCTTCG TCTACAGAGA AGCAAAGCTA ACGCTCGTAA
TTACAACCGC ATTTTAATCA TGAGTGTCGA AATGGAAACG TGCCCGGCGT CTGCGCCTTT
CTTTGGGTTT ATGGGAGTGA CTTCCGCCCT GGTGTTTGCC AATATTGGCG CCGCGTACGG
AACAGCCAAG TCCGGAGTCG GTATTTCCTC CATGGGTGTG ATGAACCCGG GTCTGGTCAT
GCGTAACATC ATTCCCGTAG TTATGGCGGG AGTTCTGGGA ATCTACGGGC TCATTGTGGC
CGTGATTATT CAGGGTTCCA TTGTATCTCC GCAAAACGGA CTTTCTCAGT ACTCGCTATA
CACCGGCTTT GCACATTTGG CGGCTGGTCT ATGCTGCGGT CTTTCCGGTC TGGCGGCTGG
TATGGCCATT GGTATTGTAG GAGACGCCGG TGTCCGTGCG GTGGGTCAGC AAGAAAAGCT
CTTTGTCGGT ATGATTCTTA TCCTAATTTT CGCCGAAGCC CTCGGTCTTT ACGGTACGTA
CAAGGTGGGA CACGTCGGAG AGTGCACGTA TGCTGTTCCG TGCGCTCGAT GCTGCCGCTG
GATCGTATAC TTATATACAT ATGTTTTGGT TTTGGTTTGT ACAGGTTTAA TTGTGGCCTT
GATCTTGTCG CAGAACTCGT TCGTGTGCGA GGGCAACAAC TAGACGGACG TTTGTTGGAG
ATTCCGCTTT TACCTGATTT CCAGTTCCTG TAATTTTGTC GTTCCTTATG TTTCCACACA
AACGACTGCA AGCAAAATCA ACTAATTTGT TTATCACATT TCAATAGCCA GTTTGAATGT
TTTTCTTACG ATACTGTAGG CAGTGGAAGC GGA
 
Protein sequence
MSVEMETCPA SAPFFGFMGV TSALVFANIG AAYGTAKSGV GISSMGVMNP GLVMRNIIPV 
VMAGVLGIYG LIVAVIIQGS IVSPQNGLSQ YSLYTGFAHL AAGLCCGLSG LAAGMAIGIV
GDAGVRAVGQ QEKLFVGMIL ILIFAEALGL YGLIVALILS QNSFVCEGNN