Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_29011 |
Symbol | |
ID | 7202914 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 703203 |
End bp | 704315 |
Gene Length | 1113 bp |
Protein Length | 170 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182119 |
Protein GI | 219123617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00069003 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCACAAGCAC GCTAACGCAA GGACTACTAT CCCAAGGATA AGGTGTGTGC GAAGGTATGC TACAAAGTGT ATCTAAGACT CTAGATTTGG ATGGAGCTTC CTTGTATGAA CAACAGAGTG GTGCCTCCAG TGTACTGTCA GCAAGTCCGC TTCGTTTTGG CGAAACAGGA CTGAAAGTGA ACGCGTTGAT GACGGCTCGA AACCTCGTGA AGAAAAATCC ACCGTCGTGA CTCCGTCGCA AGCAGCAATC TCACCATTTT TTCTCCTTCG TCTACAGAGA AGCAAAGCTA ACGCTCGTAA TTACAACCGC ATTTTAATCA TGAGTGTCGA AATGGAAACG TGCCCGGCGT CTGCGCCTTT CTTTGGGTTT ATGGGAGTGA CTTCCGCCCT GGTGTTTGCC AATATTGGCG CCGCGTACGG AACAGCCAAG TCCGGAGTCG GTATTTCCTC CATGGGTGTG ATGAACCCGG GTCTGGTCAT GCGTAACATC ATTCCCGTAG TTATGGCGGG AGTTCTGGGA ATCTACGGGC TCATTGTGGC CGTGATTATT CAGGGTTCCA TTGTATCTCC GCAAAACGGA CTTTCTCAGT ACTCGCTATA CACCGGCTTT GCACATTTGG CGGCTGGTCT ATGCTGCGGT CTTTCCGGTC TGGCGGCTGG TATGGCCATT GGTATTGTAG GAGACGCCGG TGTCCGTGCG GTGGGTCAGC AAGAAAAGCT CTTTGTCGGT ATGATTCTTA TCCTAATTTT CGCCGAAGCC CTCGGTCTTT ACGGTACGTA CAAGGTGGGA CACGTCGGAG AGTGCACGTA TGCTGTTCCG TGCGCTCGAT GCTGCCGCTG GATCGTATAC TTATATACAT ATGTTTTGGT TTTGGTTTGT ACAGGTTTAA TTGTGGCCTT GATCTTGTCG CAGAACTCGT TCGTGTGCGA GGGCAACAAC TAGACGGACG TTTGTTGGAG ATTCCGCTTT TACCTGATTT CCAGTTCCTG TAATTTTGTC GTTCCTTATG TTTCCACACA AACGACTGCA AGCAAAATCA ACTAATTTGT TTATCACATT TCAATAGCCA GTTTGAATGT TTTTCTTACG ATACTGTAGG CAGTGGAAGC GGA
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Protein sequence | MSVEMETCPA SAPFFGFMGV TSALVFANIG AAYGTAKSGV GISSMGVMNP GLVMRNIIPV VMAGVLGIYG LIVAVIIQGS IVSPQNGLSQ YSLYTGFAHL AAGLCCGLSG LAAGMAIGIV GDAGVRAVGQ QEKLFVGMIL ILIFAEALGL YGLIVALILS QNSFVCEGNN
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