Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28882 |
Symbol | PMM1 |
ID | 7202660 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 249558 |
End bp | 250562 |
Gene Length | 1005 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | phosphomannose mutase |
Protein accession | XP_002181871 |
Protein GI | 219123104 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00141159 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAGTGCCAT TCCACTGATT GAATCTGTGA GGTTGCGATC CCTTGCCATT AACCATGAGC GCTACTCCCG TAAAGCCACG TATCCTAGCC CTCTTCGATG TTGATGGGAC ACTGACGATT CCTCGGGGTG AAATTACCCC TGACATGATG GCGTTCATGA AGGATCTCAG CAAGAAAGTG ACTGTTGGTA TTGTCGGAGG TATGCGGCCT GTTTGATCGG AATTGGAAGG TTTCCTTCGC CTCTGTACGG CTCGTTTATC TTAGATTTTG GCTCACATTG CTCTTCAATT CAGGAAGCGA CTTGCCTAAA CAGGAAGAAC AGCTCGGGAC TGGTATTGTC GACGTGTTTC CGTGGAATTT TTCGCAAAAT GGTTTGGTCG CGTACAATAA AGGTCAGCTA TTGGAGGTGC AGACCATTGC TAAATTTCTG GGGGAAGACA ATGTGAAGCG CATCGTCAAT TGGGTTTTAA AGTATTTGGT AGATATCGAC ATTCCTGTCA AGGTATGCAA CGGCTTTGAT ATGTTGTATT TCGCTTAATC ACGTCAAACT AATTCGAAAA CAATCTTCGT TTCTTGCAGC GTGGAACTTT TTTTGAATTT CGCAGTGGAA TGTTTAACAT TTCGCCTATT GGTCGTAATT GCTCCCGAGA AGAGCGCAAC GAATACGAAA GATTTGATTT GGAAAACAAC GTCCGCAAAA AAATGGTGGA AGCCATGGCC AAAGAATTTG CTGACTTGGG GTTGACTTAT TCCATTGGGG GCCAAATTTC GTTCGATTGC TTTCCGAAGG GATGGGACAA GACCTATTGC CTAAAGTTTC TAGATGCTAG TGAATTTGAC GAAATTCATT TTTTCGGTGA CAAGACCTTC GAAGGAGGCA ATGATTTTGA AATCTTTTCG CATGAGCGAA CGATCGGCCA TACTGTCACT TCCCCCGATG ACACGAAAAA TCAATGCACT AAGCTATTTA TGTAATGAAA AGACGTTTTC GAGCCGCGCG ATAAC
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Protein sequence | MSATPVKPRI LALFDVDGTL TIPRGEITPD MMAFMKDLSK KVTVGIVGGS DLPKQEEQLG TGIVDVFPWN FSQNGLVAYN KGQLLEVQTI AKFLGEDNVK RIVNWVLKYL VDIDIPVKRG TFFEFRSGMF NISPIGRNCS REERNEYERF DLENNVRKKM VEAMAKEFAD LGLTYSIGGQ ISFDCFPKGW DKTYCLKFLD ASEFDEIHFF GDKTFEGGND FEIFSHERTI GHTVTSPDDT KNQCTKLFM
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