Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21791 |
Symbol | |
ID | 7202836 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 362958 |
End bp | 364045 |
Gene Length | 1088 bp |
Protein Length | 208 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182055 |
Protein GI | 219123487 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0609833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGGCTGCCAA CCGGCAAGGT GCAAAAGTGA CTTGAAAAAA CAGACTTGAA AAAGCAAGGC GTCCTGTTGG TGTGTCCAAA AATCGAGGTG CTCTGTGTGG GAAACAACCA TTCGTGTATC CCGGGTTTGC CTTGAGAGTA CAGCGTTGTT GGAACGGATT CGTTGTTCGC TCGACAACGT GCTCCAGCGT TGACAGTTCG TACGAGCTCG TTGACTGTGA ATCGTTGCGA ACGTGAACGT CACCTCACGT ACCCTTACGT GTCTTCTGGA TCGGCGTTGC GACACACTGC TACCATGGCC GATCAAAAAA TCATGAAGAA ACGGCTCAAG GAGCTCATGA ATCGTCCAGA AAATCAAGTT TGCTCGGATT GCCCGGAACG CCAACCCCGT TGGGCGTCAC TCATTGTGCC TCCGCCGGGG GCACCCCCGG GGTCGCTCCC CATGGGGGCT TTCTGCTGTT TGGAATGTTC CGGTTCCCAT CGACGATTAG GAGTACACAT TTCCTTTGTC CGCTCCATCA ATCTGGATTC TTGTAAGTAC CCGAATATCC AAACACGTCT TGTACATACA CACAGAGATT CTTTCGCCTT TCCCGAGTAG AGTATTCCGT CTCCACAGTT CATGTCTTGA AATTGTATAT CTACCAAGTA AATCTGCTGT ATCTGACACA TGACTCTTGG TTGCGTTGCT CCAATTGCAG GGAAAGAGAA GGAAGTCATG TCGATGGAAA ATGGCGGCAA CGCCAAGGTC AACGCAGTCT TTGAAGCGAA CTTGGCTCGA TCCGGAGCCG CCAAGCCAAC CAACTTGGCC GATGGCCCTA CACGGGAACG TTTCATCCGG GACAAATACG AACGTCGCAA ATACTACGAC GCCGCGGCTT TTGGTAACCT ACCGACACCG TCTCCCACGG CGAATCGCAC TAGCACCAGC GCACCGTCCA GTGCAGTCGG ACCGCCTTCG GAAGCCGCCC GACAACGCAT GGAAGCACGT CGTTTGAAAA AGTCGCAGTC GGCTTTTACT GCCGATACAC AGAGCCATGC TATTGCCAAT ACGGCTCCAC CGAAACGGGC CACCTCCTCG GTCGGTAC
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Protein sequence | MADQKIMKKR LKELMNRPEN QVCSDCPERQ PRWASLIVPP PGAPPGSLPM GAFCCLECSG SHRRLGVHIS FVRSINLDSW KEKEVMSMEN GGNAKVNAVF EANLARSGAA KPTNLADGPT RERFIRDKYE RRKYYDAAAF GNLPTPSPTA NRTSTSAPSS AVGPPSEAAR QRMEARRLKK SQSAFTADTQ SHAIANTAPP KRATSSVG
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