Gene PHATRDRAFT_21791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21791 
Symbol 
ID7202836 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp362958 
End bp364045 
Gene Length1088 bp 
Protein Length208 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182055 
Protein GI219123487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0609833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGCTGCCAA CCGGCAAGGT GCAAAAGTGA CTTGAAAAAA CAGACTTGAA AAAGCAAGGC 
GTCCTGTTGG TGTGTCCAAA AATCGAGGTG CTCTGTGTGG GAAACAACCA TTCGTGTATC
CCGGGTTTGC CTTGAGAGTA CAGCGTTGTT GGAACGGATT CGTTGTTCGC TCGACAACGT
GCTCCAGCGT TGACAGTTCG TACGAGCTCG TTGACTGTGA ATCGTTGCGA ACGTGAACGT
CACCTCACGT ACCCTTACGT GTCTTCTGGA TCGGCGTTGC GACACACTGC TACCATGGCC
GATCAAAAAA TCATGAAGAA ACGGCTCAAG GAGCTCATGA ATCGTCCAGA AAATCAAGTT
TGCTCGGATT GCCCGGAACG CCAACCCCGT TGGGCGTCAC TCATTGTGCC TCCGCCGGGG
GCACCCCCGG GGTCGCTCCC CATGGGGGCT TTCTGCTGTT TGGAATGTTC CGGTTCCCAT
CGACGATTAG GAGTACACAT TTCCTTTGTC CGCTCCATCA ATCTGGATTC TTGTAAGTAC
CCGAATATCC AAACACGTCT TGTACATACA CACAGAGATT CTTTCGCCTT TCCCGAGTAG
AGTATTCCGT CTCCACAGTT CATGTCTTGA AATTGTATAT CTACCAAGTA AATCTGCTGT
ATCTGACACA TGACTCTTGG TTGCGTTGCT CCAATTGCAG GGAAAGAGAA GGAAGTCATG
TCGATGGAAA ATGGCGGCAA CGCCAAGGTC AACGCAGTCT TTGAAGCGAA CTTGGCTCGA
TCCGGAGCCG CCAAGCCAAC CAACTTGGCC GATGGCCCTA CACGGGAACG TTTCATCCGG
GACAAATACG AACGTCGCAA ATACTACGAC GCCGCGGCTT TTGGTAACCT ACCGACACCG
TCTCCCACGG CGAATCGCAC TAGCACCAGC GCACCGTCCA GTGCAGTCGG ACCGCCTTCG
GAAGCCGCCC GACAACGCAT GGAAGCACGT CGTTTGAAAA AGTCGCAGTC GGCTTTTACT
GCCGATACAC AGAGCCATGC TATTGCCAAT ACGGCTCCAC CGAAACGGGC CACCTCCTCG
GTCGGTAC
 
Protein sequence
MADQKIMKKR LKELMNRPEN QVCSDCPERQ PRWASLIVPP PGAPPGSLPM GAFCCLECSG 
SHRRLGVHIS FVRSINLDSW KEKEVMSMEN GGNAKVNAVF EANLARSGAA KPTNLADGPT
RERFIRDKYE RRKYYDAAAF GNLPTPSPTA NRTSTSAPSS AVGPPSEAAR QRMEARRLKK
SQSAFTADTQ SHAIANTAPP KRATSSVG