Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_1745 |
Symbol | |
ID | 7202873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 504300 |
End bp | 505412 |
Gene Length | 1113 bp |
Protein Length | 371 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181921 |
Protein GI | 219123208 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATCGAAAGCT TTGGACGGAT AACAAAGGAA ATATGCCGCT TCCCTTCGTT TTTCAATGGT CCTCTGTATC AACGCATTTT AGATCTCTGG AATGCTGATC ACCATACTCA CGCACCGATC CTCTGTGTCT CCTTCGCCAT GCTGGAATGG TTCTGGATGA CGCAAATGGA GCCATACGAT GAAATTGATC GCTTTTTCAA CCTAATCAAA GCACCAGATC GAGACTATAT TATTCGGGAT GATTTTTTGC CGTTTACCAA AGCGCTGTTG GCCGATCATC CGGGCCTCGA ATTTCTCAGC AGTCATCAAG AGTTTCAAGA AAAATACGCA ATTACGGTGA TAACACGCAT CTTTTACGTC GTCAACCGAT CGCACTCGGG CCGAATTACC TCGCGGCAAA TTCGACGATC TGACCTACTC GAAGCTTTTC AGCAAGTCGA CGAGGAAGAA GATATCAACA AGGTCACTCG ATACTTTTCG TACGAGCATT TTTACGTTTT GTACTGTCGC TTTTGGGAGC TGGACCACGA TCGCGACTAT CGCATCACGA GAGAAGATCT GCTAAAGTAC GGCGATCATT CATTGTCCCA CATGATCGTG GATCGCATAT TTGAAGCCGC TCCGCGGCCT TTTGAGAACG ATAAGGTCAA CCGAGAGTTT ATTTCGTACG AAGACTTCAT TTATTTCATG CTGTCGGAAG AAGACAAGTC GAACGAGATC AGTGTACGTT ACTGGTTTAC CTGTGTCGAT GTGGACGGTG ACAGCAAACT GAACAATATG GAAATGCGCA GTTTTTATGC CGTCCAACTG CACCGAATGC AGTGTATGGG CCACGAAGTT GTCCCCTTCG AAGACATGTT GTGTCAGATG ATGGACATGA TTAAACCGGC CAACACGGAT CACGTTGTGG CCGAAGATTT TCTGCAGCCC GAGTGTAAGA ATGTATCCGG CGCTCTCTTT GACGCCTTGT TTAATCTCAA CAAATACCTC ATGTTTGAAC AACGTGATCC GTTTGCTGAG CGACAGAAAC GGGAGGATGA ATTTGAGTGC GATTGGGATC GTTTTGCCTG CATGGACTAC AACCGACTGG CGATGGAGGA AGAAGTTCGT GAA
|
Protein sequence | IESFGRITKE ICRFPSFFNG PLYQRILDLW NADHHTHAPI LCVSFAMLEW FWMTQMEPYD EIDRFFNLIK APDRDYIIRD DFLPFTKALL ADHPGLEFLS SHQEFQEKYA ITVITRIFYV VNRSHSGRIT SRQIRRSDLL EAFQQVDEEE DINKVTRYFS YEHFYVLYCR FWELDHDRDY RITREDLLKY GDHSLSHMIV DRIFEAAPRP FENDKVNREF ISYEDFIYFM LSEEDKSNEI SVRYWFTCVD VDGDSKLNNM EMRSFYAVQL HRMQCMGHEV VPFEDMLCQM MDMIKPANTD HVVAEDFLQP ECKNVSGALF DALFNLNKYL MFEQRDPFAE RQKREDEFEC DWDRFACMDY NRLAMEEEVR E
|
| |