Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14177 |
Symbol | |
ID | 7202685 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 406470 |
End bp | 407657 |
Gene Length | 1188 bp |
Protein Length | 370 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182061 |
Protein GI | 219123499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.324881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCCTGGGAAG ACGGCCACGT CAAGATTGTT GTCCGGCGGA AGCACTTATT GCTGGACAGC GTAGATGCTG TCATGAGTTT GGGACGGGAC GATTTGCGCA AACGGTGGAG GGTGGAGTTT TTGGGAGAGC CGGGTATGGA CGTAGGCGGT GTTTCGCGCG AGTGGTTTCA GCTCGTAACG GAACAAATAT ACGATCCCGA TTTCGGGTTG TGGTTGTCTT CCGTCAACAA TCAAATGTGT ATGAATATCA ACCCGTCGAG CGGTATGTAT TCCATTACAG GGAGTTGACT TTGCATTGGC TCGTGTCACT CATCAATCTT CTTTTATTCC TGTGTAGGTA TGTCATGCCC GGAGGACCAC TTTATTTACT TTCGCTTTCT TGGTCGCATT CTTGGAAGGG CGCTCTTTGA TCGGCAAGTA GTCAAGGGTC ACATGGTTCG GACTCTTTAC AAGCACCTTT TAGGGTGGCC TATCACTTTC GAAGATATCC AATCACAAGA CGAAGAATAC TATCAATCCC TCAAGAAACT CACCAAAATG GAAGACGTTT CGTTGATGTG CCTTGATTTT ACTGCAACAG AAGAAAGCTT GGGCGTTCGC ACCGAAGTCG ATCTTGTGGA AGGCGGGGCT CTCAAGGAAG TGACCAACGA GAATCTTGCT CAGTATCTGG AGGCGAATCT ACAGTATCGT ATGCTAGGTC GCATCAAGCC ACAAGTTACC GAGTTGCTAC TGGGCTTTTT CGACATAATC CCAGAACCAG CGTTAACTGT ATTTGACGCG AACGAACTTG AACTTATTCT CTGTGGGCTC CCCGAAATTG ACATGGTGGA CTGGCAGCAG AATACACTAT ATTCTGGTAT GTTCGAAGGA AAGGGCTGCA GTAGCGAAGT AGTTACATGG TTTTGGGAAA TAATGAAGGA AGATTTTGAT CAAGAAATGC GTGCTCGGCT CCTACAGTTT GTTACCGGAA CATCCGGTGT GCCATCTCGA GGATTTGCAG TGCTTCAGGG AATTGACGGA AATATCAAGA AATTTACTAT TCACGGTGTG GACAGTTGCA ACTATTATCC CAAGGCCCAT ACTTGTTTTA ACAGGATCGA CCTGCCCCTG TACGCATCCA AGAAAGAGCT CTTTGACCGA CTGAAGACAG CGATTACTAT GTCGGGGGTT GGGTTCGATA TGGAATAG
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Protein sequence | AWEDGHVKIV VRRKHLLLDS VDAVMSLGRD DLRKRWRVEF LGEPGMDVGG VSREWFQLVT EQIYDPDFGL WLSSVNNQMC MNINPSSGMS CPEDHFIYFR FLGRILGRAL FDRQVVKGHM VRTLYKHLLG WPITFEDIQS QDEEYYQSLK KLTKMEDVSL MCLDFTATEE SLGVRTEVDL VEGGALKEVT NENLAQYLEA NLQYRMLGRI KPQVTELLLG FFDIIPEPAL TVFDANELEL ILCGLPEIDM VDWQQNTLYS GMFEGKGCSS EVVTWFWEIM KEDFDQEMRA RLLQFVTGTS GVPSRGFAVL QGIDGNIKKF TIHGVDSCNY YPKAHTCFNR IDLPLYASKK ELFDRLKTAI TMSGVGFDME
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