Gene PHATRDRAFT_14177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14177 
Symbol 
ID7202685 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp406470 
End bp407657 
Gene Length1188 bp 
Protein Length370 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182061 
Protein GI219123499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.324881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCTGGGAAG ACGGCCACGT CAAGATTGTT GTCCGGCGGA AGCACTTATT GCTGGACAGC 
GTAGATGCTG TCATGAGTTT GGGACGGGAC GATTTGCGCA AACGGTGGAG GGTGGAGTTT
TTGGGAGAGC CGGGTATGGA CGTAGGCGGT GTTTCGCGCG AGTGGTTTCA GCTCGTAACG
GAACAAATAT ACGATCCCGA TTTCGGGTTG TGGTTGTCTT CCGTCAACAA TCAAATGTGT
ATGAATATCA ACCCGTCGAG CGGTATGTAT TCCATTACAG GGAGTTGACT TTGCATTGGC
TCGTGTCACT CATCAATCTT CTTTTATTCC TGTGTAGGTA TGTCATGCCC GGAGGACCAC
TTTATTTACT TTCGCTTTCT TGGTCGCATT CTTGGAAGGG CGCTCTTTGA TCGGCAAGTA
GTCAAGGGTC ACATGGTTCG GACTCTTTAC AAGCACCTTT TAGGGTGGCC TATCACTTTC
GAAGATATCC AATCACAAGA CGAAGAATAC TATCAATCCC TCAAGAAACT CACCAAAATG
GAAGACGTTT CGTTGATGTG CCTTGATTTT ACTGCAACAG AAGAAAGCTT GGGCGTTCGC
ACCGAAGTCG ATCTTGTGGA AGGCGGGGCT CTCAAGGAAG TGACCAACGA GAATCTTGCT
CAGTATCTGG AGGCGAATCT ACAGTATCGT ATGCTAGGTC GCATCAAGCC ACAAGTTACC
GAGTTGCTAC TGGGCTTTTT CGACATAATC CCAGAACCAG CGTTAACTGT ATTTGACGCG
AACGAACTTG AACTTATTCT CTGTGGGCTC CCCGAAATTG ACATGGTGGA CTGGCAGCAG
AATACACTAT ATTCTGGTAT GTTCGAAGGA AAGGGCTGCA GTAGCGAAGT AGTTACATGG
TTTTGGGAAA TAATGAAGGA AGATTTTGAT CAAGAAATGC GTGCTCGGCT CCTACAGTTT
GTTACCGGAA CATCCGGTGT GCCATCTCGA GGATTTGCAG TGCTTCAGGG AATTGACGGA
AATATCAAGA AATTTACTAT TCACGGTGTG GACAGTTGCA ACTATTATCC CAAGGCCCAT
ACTTGTTTTA ACAGGATCGA CCTGCCCCTG TACGCATCCA AGAAAGAGCT CTTTGACCGA
CTGAAGACAG CGATTACTAT GTCGGGGGTT GGGTTCGATA TGGAATAG
 
Protein sequence
AWEDGHVKIV VRRKHLLLDS VDAVMSLGRD DLRKRWRVEF LGEPGMDVGG VSREWFQLVT 
EQIYDPDFGL WLSSVNNQMC MNINPSSGMS CPEDHFIYFR FLGRILGRAL FDRQVVKGHM
VRTLYKHLLG WPITFEDIQS QDEEYYQSLK KLTKMEDVSL MCLDFTATEE SLGVRTEVDL
VEGGALKEVT NENLAQYLEA NLQYRMLGRI KPQVTELLLG FFDIIPEPAL TVFDANELEL
ILCGLPEIDM VDWQQNTLYS GMFEGKGCSS EVVTWFWEIM KEDFDQEMRA RLLQFVTGTS
GVPSRGFAVL QGIDGNIKKF TIHGVDSCNY YPKAHTCFNR IDLPLYASKK ELFDRLKTAI
TMSGVGFDME