Gene PHATRDRAFT_55890 details

Gene Information

• Locus tag: PHATRDRAFT_55890
• Symbol: Hsp70_2
• ID: 7202385
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 258678
• End bp: 261517
• Gene Length: 2840 bp
• Protein Length: 732 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181519
• Protein GI: 219122370

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCATC TTCCATCCTC CTCCACCCTC CTAACCTGCG TGTCGGTACT TCTCTCCGGA 
GCTCACCCCG CAAAAGCATC ATGGCTAGCT CGTAGGACAG TAGAAAAGCC GACTCTGGCA 
CGAATCCATG AGCAGCGAGA CTCTACGGAC CGGAAATCGA GGGCGCCCTT CTTACATCGT 
CGACAGAATC ACTACGCGCA TCATCCCCAC GGGCTACTCA CTACCCTCCG TGGTGGCGCC 
AGTAATGCAG ACAACAAAAT GGACGGTCCT TGTATCGGAA TTGATCTCGG AACGACGTAT 
TCGTGTGTCG CTGTCTGGAG AAATTCTCGG GTGGACGTGT GTCCGAACGA ACAAGGTAAT 
CGGATTACCC CTTCGTACGT GGCTTTCGGC AAGGACGGCA CCCGACTAAT TGGCGACGCT 
GCGAAGAATC AGGCACCGTC CAATCCAACG GGTACGTTTT TTGACGTGAA ACGCCTGATT 
GGTCGCAAGT ACAACGATGC TACCGTGCAA AAGGACAAGA CGCTCTTTCC GTTTTCGATC 
GAAAAGGGTC CCGACGACAA ACCCTTGCTC GGATTGCCGA CCGAGTTAAA AAAGCAGCAA 
GGCAAATCTC AATATACTCC AGAAGAAGTA TCGGGAATGA TTCTGCGCAA ACTCAAGGAA 
ACCGCGGAAA CCTTTTTGGG ATGCGAAGTG AAACACGCCG TCGTAACCGT CCCAGCGTAC 
TTTAACGACG CCCAACGACA GGCGACGAAA GACGCCGGAA CAATTGCCGG TCTTAAGATC 
GAACGAGTCA TTAATGAACC CACCGCAGCC GCAATTGCCT ACGGACTAGA TAAGCAAGAT 
GTCGAAGAGA ATGTGTTGGT TTTTGATCTT GGCGGTGGAA CGTTCGACGT GACTCTGCTC 
TCGATCGACC ACGGAGTCTT TGAAGTGCGT GCTACGTCGG GAAACACACA TCTGGGAGGT 
GAAGATTTTG ATCAACGTCT CATGGAGTAC TGCATGAGTG TTTTCAAACG TCAGTCTGGA 
ATTGATGTTT CCGGGGACAA ACGAGCGATT CAACGACTTC GCAAACAATG TGAACTGGCC 
AAGCGGACGC TATCGACTCA AACTTCCGCC ACGATCGATT GTGACGCTTT TTCCAACGGT 
GTTGACTTTA CCACCACCAT TTCGCGAGCC AAATTTGAAG AATTGAACAT CGACTTATTC 
AAAAAGACTA TGGTTCCTGT TACTCAAGTC CTGAAAGATG CGGGAATGAG CAAAAGCGAG 
ATTGACGAAA TTATTCTCGT TGGTGGTTCT ACTCGAATTC CAAAAGTCCA GCAGATGTTG 
ACGGAGTACT TTGGCGGCAA GGAACTGAAT AAGGGGATCA ACCCGGATGA AGCCGTGGTA 
CGTATACCTT TTGGAAGGAA AAAATGGTTC AGGGACTGGT GCTACTGACG AAAACTTCGT 
AACGCTTGGC TACTGAAGAG GGCTTTGCGA CCGGAGTAGT TACCGGGCCT ACTCGCCGAG 
TCGCTCCTGA TGCGAACAGT TACACATAAA CAACAACCGA AGCACAACAA CTCCATGGGA 
CTATTGCCGA ATGACTAGAA GTTTTCCGTA TGCTGACACG CTGCTGTTTG TATTTTTGTA 
GGCCTACGGT GCTGCGGTCC AGGGAGGAAT TTTGAGCGGC GACGCGGCCG AGGCGACCAA 
GGATGTGTTG TTACTTGATG TCGCACCCTT GTCACTAGGC ATTGAAACCG CCGGTGGCGT 
CATGACTCCC TTGATCAAAC GGGGTACCAC AATTCCGGTC AAAAAGTCCC AAGTATTTTC 
GACGTACGCT GATAATCAAC CCGGCGTGAA TATTCAAGTT TTTGAAGGCG AACGGTCCAT 
GACTAAGTCC AACCGGCTTT TGGGGCAATT CGAGTTGGCG GGCATCCCAC CCGCTCCACG 
CGGTGTACCC CAAATTGAAG TTAGTTTTGA CGTGGATGCC AATGGAATTC TAAGCATATC 
GGCATCCGAC AAAGGGACTG GTAAATTGGA AACCTTAACC ATCACCAGTG AAAAGGGTCG 
GCTTTCGGAA GAAGAAATTG AACGAATGAT ACAAGAAGCG GAACAGTTCG CCGATCAGGA 
TGCCGCCGAA AAGGAAAAGG TCCAGGCTCG GAATGATTGT GAAGCATATT TGTACAATCT 
GAAAAACTCC ATGAATGATG CTCTTCAGGA TAAGCTTTCT GCGGAAGACA AAGAAACACT 
ATCACAGGCC ATTGAGGAAG GTTTGGTGTG GTTGGAAAAC AACCCCGCGG CGGAAAAAGA 
CGCGTACGAT GCCAAGCAAA AGGAGGTGGA ACAAGTTGCT AATCCCATTC TCAAGCGAGC 
CTACGAAAGC ACCAGTGATG GTGCGGCCGC TGCTGACAAT GATTTTTTAG GTGAAGATTT 
GGACGGTGTA GATGACGGCC CGAGTGTAGA AGAAGTAGAT TAACCATAGC ATAGAACACA 
GACAAGCTCT GAAAGCTTCC TTCGATACCA ACTCAATCTT TCGGTTTTCG AGTTGGCTCG 
TGAAGCCACT GCCAAGAATC AGCCTCCATG TCCGGTAGTT GAGCCCAAAA ACTGCGTACG 
TGCTGGACGC CATCCCACTG ATACTCACCA GTCGTCTGCA CTCCAGCAAA GGGACCCAAT 
ACTGGATCTT GTAGGAGTTC GTAAGTGTCG TATTCCCTCT CGGTCAACAC ATGCTTCAAA 
ATTGTTTTGT ACGAGTTACT CCAATCAACG TTTGCAAACC GTGTGGCTAT CACTTGCAAA 
GTCTGTACCT GAGCAACATC TTTCATCCCC AACAGTGTAC ACGGCACGCC AGGATAAGCC 
AAGGCGCAAA CAAGCGCAAG 

 

Protein sequence

MVHLPSSSTL LTCVSVLLSG AHPAKASWLA RRTVEKPTLA RIHEQRDSTD RKSRAPFLHR 
RQNHYAHHPH GLLTTLRGGA SNADNKMDGP CIGIDLGTTY SCVAVWRNSR VDVCPNEQGN 
RITPSYVAFG KDGTRLIGDA AKNQAPSNPT GTFFDVKRLI GRKYNDATVQ KDKTLFPFSI 
EKGPDDKPLL GLPTELKKQQ GKSQYTPEEV SGMILRKLKE TAETFLGCEV KHAVVTVPAY 
FNDAQRQATK DAGTIAGLKI ERVINEPTAA AIAYGLDKQD VEENVLVFDL GGGTFDVTLL 
SIDHGVFEVR ATSGNTHLGG EDFDQRLMEY CMSVFKRQSG IDVSGDKRAI QRLRKQCELA 
KRTLSTQTSA TIDCDAFSNG VDFTTTISRA KFEELNIDLF KKTMVPVTQV LKDAGMSKSE 
IDEIILVGGS TRIPKVQQML TEYFGGKELN KGINPDEAVA YGAAVQGGIL SGDAAEATKD 
VLLLDVAPLS LGIETAGGVM TPLIKRGTTI PVKKSQVFST YADNQPGVNI QVFEGERSMT 
KSNRLLGQFE LAGIPPAPRG VPQIEVSFDV DANGILSISA SDKGTGKLET LTITSEKGRL 
SEEEIERMIQ EAEQFADQDA AEKEKVQARN DCEAYLYNLK NSMNDALQDK LSAEDKETLS 
QAIEEGLVWL ENNPAAEKDA YDAKQKEVEQ VANPILKRAY ESTSDGAAAA DNDFLGEDLD 
GVDDGPSVEE VD