| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54730 |
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| Symbol | AP4beta |
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| ID | 7202532 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 489032 |
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| End bp | 491741 |
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| Gene Length | 2710 bp |
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| Protein Length | 805 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181569 |
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| Protein GI | 219122474 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.442884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCGACTAGAA AAAAGAGTGT TAGGACCAAC GCAGGTCCTT CTCTTTCGTC TTTTTCGGAT
CGGATAGCGG ATACATCGTC TAACGCGTTC GTTCGTTCGT TCTGGCTTTC ATCTAGAATA
GTGTATACGA CGGGCCTCCA CTCTGGCACG TACCGACAAA CAAGCTATGT CGACCCCGTA
CGCTGGCCAA GCCCCACCGC CTCCGGGCGG GGCTACGGCA ACAGCGGGTG TTCCCGATTC
GTACTTTACC GAATCGCGCA AGGGTGAAAT CAACGAACTA CGAACCCTGT TGCGAGCCTT
TGCCACCGAA CGGGATCCGC AACGCAAACG AGATATTATT AAAAAAGTCA TTGCCTATAT
GACGCTTGGC ATTGACGTAT CGCGACTCTT TTCCGAAATG ATGTAAGTTG ACATAGAACA
CTCTGCGTCG GTTTTTGCAC TGCTCGTCGC TGGAACTACG TTTGTTTCTA ACACTGTAGA
AATCCATTCC TTCTCTTGTT GGTGTGGTCA TTTGTGTGGA AACAGGATGG CGATTGAAAC
ACGCGATCTC GTTATCAAAA AGATGGTCTA TTTGTACTTG ACCAACTACG CCCGCACCCA
TCCGGATCTG GCACAAATGT GCACCAACAC CTTGCAGAAA GACTGCGGCA ACGAGGATCC
CATGGTCCGT GGCCTCGCCT TGCGGGCCCT CTGCGGTCTT AATCTCCCCC AAATGGTCGA
ATACATTAGT GAACCGTTGC GCCGGGCCTT GACCGATGGA CACGCCTACG TGCGCAAAAC
AGGAGTCATG GGGATCCTCA AATTGTACCA TTTGGACCCG GATGGCTTCC ACGAAGCAAA
CTTTGTCGAT ATTCTCTACG ACATGTTGCG GGATCCCGAC GCCAGTGTCA TCACGAACTG
TATCATCGTG CTCAACGAAG TTATGCAAAA ATCTCCCAAC GGTGGCATGG CGATTAATCG
GGCCATTATG TTGCACCTGC TCAACCGGAT TCACGAGTTT AACGAATTCG CCAAGGTGCA
AGTGCTGGAA CTCGTTCCGC GCTATATTCC CGCCAACGAA GACGAAGGCT TCCAAATTAT
GAATCTGCTT GATCCCGTCT TGCGCACATC TTCTAGTGGA GCCGTTGTGG CAACCGTGCG
GGCCTTTCTG AGTCTTTCGG ATACCCTGGA CGACGGATCT GAAGCAATGA AGCGGCAAAT
TGTGGCCCGC GTCAAGGCGC CACTCGTGAC GCAAATATCC TCTGGGTCGT CCGAAATTAT
GTACACCCTA CTCAAACACG TCGACACCTT GACGACCATT TGTCCGGGAG TCTTCGACGA
CGAATACCGA CAATTTTATG TACGCTACAA CGAACCCACG CACGTAAAGT ACCTGAAAGT
TGCCATTCTA CCCCGCATGG CGAACCCGGA CACGGCGCCC GACATTGTTT CCGAATTGGC
CGAAATGGTC CACGATCGCA ACACCAAGCT GTCTCGCGCA GCCGTCGTAT CTATGGGCCG
GATCGCGTGT AGTGGTAACG GTGGAGCGGG TGCCGCTGAG AGCATTGCAC GCCGACTCGT
GGAACTGATG GATTCCGGAA CCGATCATAT TGCGAGCGAA GCCGCTACTG CTTTGACTCT
CATGGTCCGC AAAGAACCTT CCATCAAGAC GCTAGTGGCA CCACCTCTAG TGCGATCGCT
CAAGTATATT GCAGAGTCGT CTGGTAAGGC TAGTACCATT ATCTTGTTGG GCGAATGCGG
AGAGCTCGTC ACCGAAGCCC CTTACGCACT GGAAAAATTG ATTGACACCT ACGATGACAT
CCACGATGTG AACATCAAGA TTGCACTTTT GACAAGCACT GTGAGATTGT TTTTTATGCG
ACCTCCGGAA GTTCAGCGCA TGCTTGGACG GTTATTGGCG GTAGCAACAG ATGATGTCTC
GTCGCAGGAT TTGCACGATA GGGCTTTGAT GTATTATCGG ATGCTGCAAT CTGGCGCCGA
CCCACACACA TTGGAACGCG TCGTTCGAAC TAGTACGGTG GTCGCGCAGG GTGTGAGTTT
CGCCGAAGAA GACGACTCGG AACTTCGCAA GGAACTCATG GAAGAATTCA ATACGCTGTC
AATCATTTAC GGCAAACCAT CAGTCAACTT TATTGCGCCC GAATTCCAGG TCAAATACAA
AAAAATGCCA GACGAGCACC CTCTGGCACC TGGAGAAACG GGTTCATTTG TTGCCCCGCC
GGTGGCACCC GTCCCTGCAG CGAGTATTCC CGTCGTCTCA AACGATGTAG ACTTGTTGGG
ATTTGGTGAT GCTGAACCGA TGGCCGCACC AGCACCGATG GCATCCAACA ATCTCACACT
GAGTGCTTCG GCGTCCATGA CCGGCGGAGA ATACCAAAGC CAGTGGGGAT CGGTTTCGGA
TGCCGATGCG ACAGTGTCTG ATGTTCCCCT GCGAGCTTTG CCGTCCTCAA CAGATGAGAT
TGAAAATGTC CTGGCCGCCG TAAATATCAT GACCATGGCA AGTGGGGAAT TGCCAAACGA
ATTCAAATTC TTTTTGTACG CAAAAGACAG TTCGAGCGGT GCAACAATTA TGATTCAAAC
AAACGTGGAC AAGTCTTCTC CGTCGGATGC CTGTATGATT GCTACGATAA AGATTGGTGG
GCCGTGTCTG GACCCTACAG GATTGGCTGA ACAGGTCATT CAAATAATGC GTATGCAACT
ATCCTAGTAG
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| Protein sequence | MSTPYAGQAP PPPGGATATA GVPDSYFTES RKGEINELRT LLRAFATERD PQRKRDIIKK
VIAYMTLGID VSRLFSEMMM AIETRDLVIK KMVYLYLTNY ARTHPDLAQM CTNTLQKDCG
NEDPMVRGLA LRALCGLNLP QMVEYISEPL RRALTDGHAY VRKTGVMGIL KLYHLDPDGF
HEANFVDILY DMLRDPDASV ITNCIIVLNE VMQKSPNGGM AINRAIMLHL LNRIHEFNEF
AKVQVLELVP RYIPANEDEG FQIMNLLDPV LRTSSSGAVV ATVRAFLSLS DTLDDGSEAM
KRQIVARVKA PLVTQISSGS SEIMYTLLKH VDTLTTICPG VFDDEYRQFY VRYNEPTHVK
YLKVAILPRM ANPDTAPDIV SELAEMVHDR NTKLSRAAVV SMGRIACSGN GGAGAAESIA
RRLVELMDSG TDHIASEAAT ALTLMVRKEP SIKTLVAPPL VRSLKYIAES SGKASTIILL
GECGELVTEA PYALEKLIDT YDDIHDVNIK IALLTSTVRL FFMRPPEVQR MLGRLLAVAT
DDVSSQDLHD RALMYYRMLQ SGADPHTLER VVRTSTVVAQ GVSFAEEDDS ELRKELMEEF
NTLSIIYGKP SVNFIAPEFQ VKYKKMPDEH PLAPGETGSF VAPPVAPVPA ASIPVVSNDV
DLLGFGDAEP MAAPAPMASN NLTLSASASM TGGEYQSQWG SVSDADATVS DVPLRALPSS
TDEIENVLAA VNIMTMASGE LPNEFKFFLY AKDSSSGATI MIQTNVDKSS PSDACMIATI
KIGGPCLDPT GLAEQVIQIM RMQLS
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