| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54708 |
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| Symbol | |
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| ID | 7202333 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 2430 |
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| End bp | 5884 |
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| Gene Length | 3455 bp |
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| Protein Length | 874 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181467 |
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| Protein GI | 219122261 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGTTCTACAG AGTCTGTACA CTACGATGGT GTATACAACA CGGTGTCACT GTAAAACGCA
TCGTTGCCCA GTGTGTAACG AGGGCTCCGT CCAATCCAGC AGGATACATA GGTATCGTGC
TGTGGATGGT TCCAAGAGCA ACGTGGTGGA TATATATATA GATAGATGGT CTTGGAATAC
GATGCACTCG GGGGAGCGGT TGACGGACAA CCAACCCCTG CCGTCGAATG CACGTTTTGG
AATCATCTCT ATTCGAGTAT GGGTGGTACG GTACACACCC GTCCATCGGC TAGTTGGTAG
TAAGTAAGTA CACTCCGATG TTTGGGTACG GCATGCATAT TGCGACGACA TCCGGAATTG
ATTCTTGTCA AAATTGTTGG TGATTTTGGA CGTGTCTCAT ATATCCATAT ATGCGCTGTT
TTGGCATGGG TCCATCGTGT ATATAGAACA AGGTCGGACT TCTTTTCTAT GGAAGTCCCA
AGGAACGGAA CACCCTGGGT GTAGGAAAGC CCTTTTCCTG GTTTGGTACG GTTGCGAACG
ATTGTATCGT GCTGGGTAGA TTCTTCCGGG ACACGAGATT TCCTATGTGT AGACGGGACA
TCTTCATGTG CTATCCGAAG TCGTCCGTAC CCCCTTACAC CCCCACAAAG CTCGAAGTGG
GGGGGAATCG TAGGGACGAG CTTTTCCAGG GATTTCCGGA CGAAGTGGGC GCTGCTTCGG
ATACCATACC GGCAAGGCAG TATGGTATTT GGCATTCTTG GAAAGTCCCC AAACGACGAA
TATTTCTTCC GTTGGCGATA CGTTGAAACG GTAACACGTT TCCAACCCCA AATGGTTCCA
ACGGTCGTTT GGAGTCCCGT ATACTCGGTT TCCAACGCTC GTTACCAATC AGAGTAGGGT
ATTTCTATCA ATTCGTGACT CCTTCTTCCG GTCTCGTCCA AGGGTCGGCG GCGCGCGGAA
AAAACAAAAG TCACGCCCGA CCCAACGGAC GCTACGGCAT TGGTAGATAC CGCTTGGGTA
CAACGTCACC CGTAGGTGTG CAAGGAACGC CTCGGACTCT TCTGGTACCC AAGCCCCGCC
AGTCCAGTTG GCACGAGTCG AGAGGTCCCG TCCGCGCCGG CCCCAACGTA CGCGTCGTAC
GTACCGAAAC GCACTGCAAG TCTTGGGAAC GAGCCGAGTG TTGGCCGGCA TGCGGACCAG
GAACCCCGGG AGCCGACGTT CCGCGACCGC GAAAGGCTTC TCGTGTCTCG CGTGCCGGAC
AATTTTCGTC CAGCGGTTGA GGGGGTGCGG GTAGGTTGGT GTAGTTTTTG GGAACGGTAC
CGTACCGTAC GGTTTATACG AATGGATCCG GTGCGGTGCG GTACACAAAA CCGTTTGGGC
GGAGTCCTTT GGTTCTTCGT TCGCAAAACA CTGGCTTGTT TTTGGCTCCA CTGGTCTTGG
ATTTACATTA CCACCACAAG TACACACCAA TATACACCAA CACATACACA AGAGACAATG
TTGGGTTCCA GAATTGCAAG CACTACGGTG TTGGTTACGG CGTTGTTGGC GTGGACCATG
CCGGAGACGC AGGCTCGTTT CACTCCGATC GTCACGTACG CCCCCATGAC CAAGGTGACG
GACGTGGCGG CGTTGGACCT CGACCAGAAC GAACTGGAGC GACAACTGGG GGTCGGCGCT
TTGAATAACG CCCGTGCCGT CTACGAACGC GGCGGTAACT CGTTGTCCAT TGCCAATCTA
ACCCTCGTCA ACCCACCGGG TCCCATGTCG TACCCGCAAG GAACGCAAGT TCTCGGCCGA
ACCAAGGGCT CGGCCAACAC CACCGTTCTC GGAATTCTAG TCGACGAAAG CGTGACGTGG
GGTGCCAACC CTGGAAACGT TACCATCCAC GTGCAGTACG TTACTTCCAC GAACCAAAAG
ACCTACTCCG ACTGCCAATC CGGTGGACTC TGGACCTTTA GTGAAGCGAA CCTCAACGGT
TGTAAGTGCC AACGGACGGG AACGCTGAGA CTCTTACCTG TCGCACGTGC AATATTCACA
GACTCACCCT TTGCCGTTCC CCTTGCTTCT TCGCGTGGCA AATCGTATCC CAGGCTACAA
TGATCAAGGT CATGTTACGC TGGTGCCCCC CGGTGAATCT GCGAATCGCG GCGACAAGCT
CGCCTACAAG TACGATATTC GACAGGACAA CTGGAACCTG CGTACGCTCC AGAGTCTCAG
TACCAACGCG GATACTTCCA TGAGACCTTG CCCCGGATGC CCCTTTTACG CAGACTTTCA
GACCTTTGTC AACTACTACG AAACGACCGA GTACGCCGAC TCGTGGATCA TGGCGGCGGC
ACTCAACCGA TCCGTCGCCT TTCCCTCCGG TCGAGGAAAC GCCAATTTTG GCGCCGCCTT
TACCAGCGGC AGCAAACTTG GACTCGCCGA AGCCGTCAAG AAGGGAACAG CCTACATGAG
CGTCTTTATG CAAATCATTC GGGATCTCGA AGACGCCATG ACGGACTGTG ACAACAAGTG
CGACCCCGAC GACCTCTCCT GTCAGGATAT TGGAGCGGAA GCGGTCCATT CATTGGACGC
CGCTGTCGCT CTCTACGCCG GATCGCTAGA AGGGACTGAT GGGACGGAGA ACAGCGGAGT
CATGCCTTAT GCACTCGCCA ACAGACGGGC CGCTGATTTC CGCACCGGTG GACCTCAAGG
CGAACGCAGC TCCGGTACCG CCCACGTCAA CTACGAGGTT ATCAAGGAGT TCAAGCACGC
ACAGACCAGG CTCCTGGCAG ATGAGTGCAA TTTGGCGCGT CAAAACAAGT GGCGCATTGT
CAATCTCATG AAGGTCCCGC TGGTCCAGGG TGTCCTGCGG TACGCCTACA TGCGTGATTT
CAACAACCCC AGTGACGCGC CCACCAGAGA AAAGGAGCAA GCCGAGGGCG CCACATTTGC
CGCCGCACTC TTGCCATTCG TGCACAAGTG CGATACCGCA GACGCTACTT TGATTTACAA
CAACATGCGC ATCGGATCCG ATGCGAATAA AGTCGTCTTT GCCGATGTCA AGGCCGCCCT
GGAGCGCAAC TACGGTTGCA TGGGAATCAG CTGTCCTCTG GTGGGCGGAT TCCACAATGG
ACAAGACTAC GAGCTGGGTG CGACGCCGTG TACCGAAGGA ACTCTACAGG GCCCCGCGGC
ACCCGATTTC TCCCAATTAC CGTCCTCCAG CGGGGGTTCG GGCGGAGGTA ACGCTGGTGT
GGCGGTCGGC TGGATCCTTG CGGTATGTCT GGCTGGTGTT GTGGGCTTTA TGGCCTACCG
ACGATTCGGC AAACGCAAGA ACATCGCCGA CGTCATGAAG CCGCCAGCGA ACAATTTGGC
GGCCGTCTCC GAAATCGCCT AAGATGCACC GAGGATAAAA CTTTTAAAAG TGCATACCAA
GGAGATACTA TATACTATAA GAAACTGGTT TTGAG
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| Protein sequence | MVYTTRCHCK THRCPVCNEG SVQSSRIHRY RAVDGSKSNV VDIYIDRWSW NTMHSGERLT
DNQPLPSNAR FGIISIRVWV VRYTPVHRLV GSNPKERNTL GVGKPFSWFG TVANDCIVLG
RFFRDTRFPM CRRDIFMCYP KSSVPPYTPT KLEVGGNRRD ELFQGFPDEV GAASDTIPAR
QYGIWHSWKV CKERLGLFWY PSPASPVGTS REVPSAPAPT YASYVPKRTA SLGNEPSVGR
HADQEPREPT FRDRERLLVS RVPDNFRPAV EGVRTMLGSR IASTTVLVTA LLAWTMPETQ
ARFTPIVTYA PMTKVTDVAA LDLDQNELER QLGVGALNNA RAVYERGGNS LSIANLTLVN
PPGPMSYPQG TQVLGRTKGS ANTTVLGILV DESVTWGANP GNVTIHVQPT PTANPVDSGP
LVKRTSTVTH PLPFPLLLRV ANRIPGYNDQ GHVTLVPPGE SANRGDKLAY KYDIRQDNWN
LRTLQSLSTN ADTSMRPCPG CPFYADFQTF VNYYETTEYA DSWIMAAALN RSVAFPSGRG
NANFGAAFTS GSKLGLAEAV KKGTAYMSVF MQIIRDLEDA MTDCDNKCDP DDLSCQDIGA
EAVHSLDAAV ALYAGSLEGT DGTENSGVMP YALANRRAAD FRTGGPQGER SSGTAHVNYE
VIKEFKHAQT RLLADECNLA RQNKWRIVNL MKVPLVQGVL RYAYMRDFNN PSDAPTREKE
QAEGATFAAA LLPFVHKCDT ADATLIYNNM RIGSDANKVV FADVKAALER NYGCMGISCP
LVGGFHNGQD YELGATPCTE GTLQGPAAPD FSQLPSSSGG SGGGNAGVAV GWILAVCLAG
VVGFMAYRRF GKRKNIADVM KPPANNLAAV SEIA
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