Gene PHATRDRAFT_47518 details

Gene Information

• Locus tag: PHATRDRAFT_47518
• ID: 7202292
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 869255
• End bp: 872970
• Gene Length: 3716 bp
• Protein Length: 953 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002181645
• Protein GI: 219122631

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.668741
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACAT CCGTATGCAA TAGCTCCAGC AATCCACGAT ACGGCCCATT GGAGCCTCGC 
CGTCGAAAAA CTAATATACA AAGGATGCTA CGACAGGAGA GTGGTGGTCG GGCATCCACC 
TACCGTCTAC GAATTACCCA GCCCTGTCCA ATCCTTTTGC TGCTTCTTTT ACTAATCGCA 
CAGTCTTCGG TGTTTGTATG GTACCACACC TGTGATGAAG CATTTTTTGT AGACCGTCCC 
ATCAATGAAC AAGGCATCCC AGCATTTTAC AAGCCTTCCG AACATGATTT CTGTAAGAGC 
TTCGTCCGGC ACGGGCTCTT TTCGCTTCTG GGGAATGGAA TGGTTCCGAA TGACGGTAAA 
ATCGAGAACG ACCTCTTCAA CACAGCAGCG CACACCCCGA AAGACCGCAC TACCTTGTCC 
GCTTCACGTC GTGCTTCTGC AGATTTGAAG ATGATCAAAG CCACAATCGC TGGAGAACCG 
ACAAAGGCTA CTGGGCCTGA GGACAGCTCT GTTTCGCGCG ATTTCATGAA TACCTCTGCA 
TCAAAAGAAG AGCATCTCGA AGTGTATGGA GGAGTTCCAG GCAAGAATCA ACATACAGAT 
GAAGCAATTC AACCGGTTTC CATGTTACTG CTCCGAGCTG TCGGAAACTC TCTTCCACCG 
CGTCACAGCG CTGAACAAAC ACTAAGAAAT CTGGACTTTG TCCTGACGTA CGAGGAAGCT 
TTCCCAAATC TGTCTCGCCA TTGGTTCCTG AACCGGCTTG TGGATCCACA GGTAGAGCAG 
CAAGTGGTGC AAAGGCTTCA ACAAGCAAAC GAATCCTATA CGATTATTCC CTTCGATTTG 
AAGTCCTACG ACTCCCACGT GTATCGTTTC GATTTGTTGG ACTTTCCCGA TCAAATTCAT 
TCGACCTACT CATACAACAC GTACACAGGG TTTTTCCTCG GGTTGAATGC CGAGGATCGT 
ATTATGCGTG ATAAGCTGGT GTATACTGCC AACGTCAATG GAGTTCGCAA TGAAATGCTC 
AATTATGGCA GGCACCTTAG TTCTGCAGAA TACATTCTCC CGTTTGACGG CAACTGCTTT 
CTCGCTCGAA ACGCTTGGGA AGCTATGCAG CGGAATATAC AACACAATCC AGCGGCAAAG 
TACTTTGCCG TTCCAATGGA TCGTCTTGTC GAGGAAAATG CAGCACTGCT GTCAGGTTCA 
TACAAGCCCA ATCCAGTCGA AGAACCCCAA ATTATATTTC ATCGAACGTC AATAGCCAAT 
TTCAATCCAA ATTTGCCTTA CGGTCGTCGT AACAAAGTGG ACTTGCTGCG TCGGTTGGGT 
ATTAAAGGCA TTTGGGAAAA CAATGAAGGG AATAAGTGGG ATGTCATCCT AGAGGCAACA 
AACCCAGTTG CGGAGATAGA AGCAAACGTG ATCGAAATGA CTGGAACGGC TGGATGGATC 
TCTCGGCTGT ACTCAGGGAA CAAAAATGCG GAGTTGACTG ATGCGGGTGC TTCTACAACT 
CGGGTCAGGA TGCGTCGTAC AGCAATATCG ACGCTACTGG ACCGTTTGGA CTTGCGTGCA 
GCTGTGACCT TGTACAATTT TACTTCCAAT ACGATGCTTT TCTATGACGA GCAGCAGCTG 
TACCAATCGC ATTTACTTTG GAAAAATGGA CAATTGCAAA ATCCAATGAT CAACAGCTTA 
ATGGAAAAGG CTGCCCAATC CCTAAACGAA GGTCCTTGGT CTGTTGTGGA CAAACGATCA 
TTCGGCTGCG GGCCCTCACT GAGTTGTCGT GACTACTACA ACCCCTGGCC ATACATGTGG 
CCGCAGCGCA ACGAATCCGG TAGTATCGAT TGGACAAGGG AGTTTGTAAT GAACAACGGT 
GAAATCCTTC CGGGAAGTGT ATTGTATACT GAAGGAAGTG AGCACTTTGA CTACACGCGC 
TTAGAGTCGA TGCAGCGCAA TACTACCGTT TTAGCGCTGG CCTATGCAAT ATCTGCCAAC 
CAGTCCTACG CCGAAAAGGC TGCTGCCAAC CTTCGTGTAT GGTTTCTTGA ACCGGGGACC 
AGAATGAATC CCAACCTCTC GTACACTCAG GTTGCGTGGG TGGGCAATCC GCCCCAGTGG 
AGACGAAAAG CCTTTGGCAC GATCGAAATG AGTGGTGTGT ACTTTTTTCT GGACGCAGTT 
AGGATAGTAG AAGGCTCCGG AGCCCTCTCG ATTCTGGAGA TCCATAATTT ACGAAGATGG 
TTTCGCGAAT ACCTTCATTG GCTATATATG TCCAACGGAC GGAAAGAAGC TTCTGAATTC 
GATCCAAATG GCGGCATACC GGAAGTGTTT GCACCAAATC ATATCGGTCT TAACTTTGAT 
ATACAGCTTG CTTCTGTTGC CGCATATTGT GGCAATCTTT CCTTGGCAGT CCGCACTATC 
CATAGGGCTG TTTCTCGTCT AGATGCACAT GTCAACTCTA CCGGTGCGAT GCCAAAGGAA 
CAACGGGTGG GCAGCTGCGA GCACTTTACC GCCTTGGCCT TGAACGGGTG GTCGGTGGCT 
GCTCGTGTCG CTTCATCGAT AGGGATTGAT TACTGGCGAC GATTCCGGGT GGCGAATCGA 
AACATTTCCA AGCTGTGCCT TGCCATGGAA TACGGCAACC CACTCCTGGA CAACCGAGAG 
ACTTGTGCAG GCGACGGAGC TCCGATTGAT CCCTCCCGCT GGTGGCCACT CTTTTTCGAA 
GCCAAGTCAC GGTGTCCTCA CTTAGAAACG CGCTACCTTG TACAGAATGA GCGCGATCCG 
CCGGAGCATA GTGACTTTCC TAGTCATCAC AACCTGATTT CGGGCTCCAA CATGCCATAC 
TCAGGCGTAG CACCCTTTTG GAATTTGAAT CTGCCACCGT AGCCACAACA TATTACCATG 
ATAGTAACGA CAACACTTTA CCATTCTAAA CCGCCCTCCC CCTCAATCGA AAAACGGCAC 
AACGTGTTTG CATACGTTGC CTATGCGTAT ATCAAACATC AATAGTGCCG TTCTTGGCAG 
TTCAATTCCG GCACAAATCC GCGTTTGTGC CGTCTTCCTG TATTGTCTTT AGCGGTGTGA 
AATTGCTGGA CACGACGTTA CGAAACAAAC AATCAAATAC CTCTGTATTG TAGGCTCGAT 
ATAAATTGTC GTCGCGCTCA TACGCATCGC ATACGGCATT GTTAGCTGGA CAGAAAGTGA 
CTTCCGTCAA CGTAGGCTCA ATTTTTGGTA CCGACTGTGA GGTCAATCCG TCGTCAATTT 
CCTGTGAATC GATTGCAAAC ATGCAATCGA CACCATACAC GGCACGCGAA TTAGGACTCT 
CCGCCATGGT GGGAAAACCT CGGGTCATGC CGTCAAATAA CTCACGAACC ATGACTTGGA 
TTTTAGGCCA GATGCAATCC TTCCAGTCAA ACGCAGTGTA ATCCTGCTCC AACTTGGCGA 
TAGTTTTGGT GTCGAAAGGA AGAATATGGA TATCGTCGTC GGTCGACCGA GCTTCGCTAT 
CGAGCAAGTG AGTGGCGGTC AAGACAGATT CAGGATCCAT ACGATCACGA GGTGTCGAAA 
TCGAATGAGA CTTGTGGGCA ATACGAAAGT ACACTCGATT GTGGATGTAC AGGCGAGGTT 
GGCCGGGAGT TGCTTCGGTT AAAAGTACGA TACAACGGCA GTCAATTTTG CGGCCGTCGT 
AGGTGACGGA ATTTTCCAAA TAGCGTTGAA CGACACGACT TTCGCCACCA GCATCA 

 

Protein sequence

METSVCNSSS NPRYGPLEPR RRKTNIQRML RQESGGRAST YRLRITQPCP ILLLLLLLIA 
QSSVFVWYHT CDEAFFVDRP INEQGIPAFY KPSEHDFCKS FVRHGLFSLL GNGMVPNDGK 
IENDLFNTAA HTPKDRTTLS ASRRASADLK MIKATIAGEP TKATGPEDSS VSRDFMNTSA 
SKEEHLEVYG GVPGKNQHTD EAIQPVSMLL LRAVGNSLPP RHSAEQTLRN LDFVLTYEEA 
FPNLSRHWFL NRLVDPQVEQ QVVQRLQQAN ESYTIIPFDL KSYDSHVYRF DLLDFPDQIH 
STYSYNTYTG FFLGLNAEDR IMRDKLVYTA NVNGVRNEML NYGRHLSSAE YILPFDGNCF 
LARNAWEAMQ RNIQHNPAAK YFAVPMDRLV EENAALLSGS YKPNPVEEPQ IIFHRTSIAN 
FNPNLPYGRR NKVDLLRRLG IKGIWENNEG NKWDVILEAT NPVAEIEANV IEMTGTAGWI 
SRLYSGNKNA ELTDAGASTT RVRMRRTAIS TLLDRLDLRA AVTLYNFTSN TMLFYDEQQL 
YQSHLLWKNG QLQNPMINSL MEKAAQSLNE GPWSVVDKRS FGCGPSLSCR DYYNPWPYMW 
PQRNESGSID WTREFVMNNG EILPGSVLYT EGSEHFDYTR LESMQRNTTV LALAYAISAN 
QSYAEKAAAN LRVWFLEPGT RMNPNLSYTQ VAWVGNPPQW RRKAFGTIEM SGVYFFLDAV 
RIVEGSGALS ILEIHNLRRW FREYLHWLYM SNGRKEASEF DPNGGIPEVF APNHIGLNFD 
IQLASVAAYC GNLSLAVRTI HRAVSRLDAH VNSTGAMPKE QRVGSCEHFT ALALNGWSVA 
ARVASSIGID YWRRFRVANR NISKLCLAME YGNPLLDNRE TCAGDGAPID PSRWWPLFFE 
AKSRCPHLET RYLVQNERDP PEHSDFPSHH NLISGSNMPY SGVAPFWNLN LPP