| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47512 |
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| Symbol | |
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| ID | 7202288 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | - |
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| Start bp | 854246 |
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| End bp | 856632 |
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| Gene Length | 2387 bp |
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| Protein Length | 733 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181818 |
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| Protein GI | 219122991 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGG TCGATCCCGG GGAACTAGCC TGGCGTCGAC GTTGGGCCAA AGCTTTCCCC
ACACTTGTGC CGCACTTGAT GGATGTCGGG CCGTCGCCAG CGACCTTGCC TGTACCGATT
ACGAAATTGC CGTATCCGGA AGAATTTACA GCTACAACCG ACAATATGGA TCATTTGTGG
TGGCAGCGTC TGGCTTGGCG AACCTTTTGG GACGAGTACA CGGACGACCG ATCGCTCCCG
GACGTGGCGT CCGACGATTG TATCCCCAAT ATTAACAGCA ACAGCAACAA CACTGTAAGC
AACGCCAACA TCAACAACAT CACAGGCCTT CCTCCCGAAG ATCCCCCTTC CGTACTCCGC
AACATTGCGA CCTGGAATCA GAGTTTGGGT TACGGAGAAA TCACCGCCGA AGCGACCTGG
ACGTTGGTGC GTACCATCCA ACCGTACCTG CCATCATCCC AATCTCTGAC AGCCGTGGAT
TTGGGTAGTG GGAACGGTAA GGTCTTACTG GCGGCAGCCT TTGCCTATCC CTTTCGTAAA
CTCGTAGGCC TGGAACTCCT GCCCGGTCTC CACGAAGACG CCCTGCGGTA CCAAGCCTAC
TGGCAACAAC GGTGGAAAGG TACAGCCGCA TCCAATACAA CAATCCCGAC AACACTAGGA
GCAGCAGCAA TATCGACAAC CACCACAGTA TCGAATCTCG ATCCGTCCAC CCTAGCCACA
AAATCCAGCG AGACCGGCGC TCTTTCTCCG GCCGTGTTGG AATTCTACTG CGACGACTTT
ACCAATAGTC CAAACGTCGA TTGGATCCAT CAAGCCGACG TGGTCTTTTG CCACGCCACC
GTGTTTCAAA CAAAACTCTT GGAGCGTCTG CAAGTCTGTT GCGAACAAAC TCGTGAAGGG
ACCTTGTTTT GTATGGTCAC CAAACCCTTG CAGTGCAACG CACGCATCGA AACGTTGGCC
GAAATACGAC TCGATATGAG TTGGGGACGA GCGGCCGTCT ACGTGCAACG CCGTAGAATC
CATCATCGAC TACCACCAAC CGAGACAGCG ACAGATTTGT CTCTTAATGT CACCACGACG
ACTGTGTCAA CCACGTCTCC GAACGATCAA TCGGCCCCAC AGGCCACTGA ACTAAGAGCC
AACGCCGATT CCTCCGACCG TGGCACTAAT TGTACCAGAC ACAGCATGGC TTCCCAAAAA
CGACCAATGT AAGTATCGTC TCGTGCATTT ATTGGAACTT TTGTTGTACA CGAGAGACAT
CCTTTCTCAA ACGGATTCGT TCGGCGATCC AATGTAGGCC TACAAGTTCT ACCGAGACGG
CTGTAGCACA AAAGAAGCGT CTAGTGGCCG ATTCCGAAGC AACGCTTGCA GAATCTGCCC
TGTCGTTGAA CGAGGTACCG GAAACAATGG AGTCACCGCC TCATTTGGTA AGCTTCGAAG
CACCTTGTCC AAGAGGCGAG CCGAGAGAGG AAAAAGTGTG TTCGACAGTC GCGAGACCAA
TCGGAGATGA GTACCGAATT TTGCATCTGG ACGATTGCCC CGATCTTATA CACCAAGTTG
GCGGTGCCGT CCTTACGTGC CCACCAGATC TCGAATCCAT GCTGTGGGAG ATGGGCGACA
GCGTTCCGGA TCCTACCAAA CTGACGGGAC AGCAACAGTA CAACCGAGTA TCGGGCAAAT
CTTCCATGAG TGTACGGTAC CGTATGTACG ATGGCAGCAA TTTGCAGCAA TCGTTCGCCG
CCAGTAGCAA TACCCGAACG GAAAAACAGT TCCTCGCCCG CTGCGGCCCA TCGCTCGATC
TATTTGATGC GGTCCTGCGG CAATTTGTGC TGGAGCAAAA ATTTTGCAAG TCCTGGCACG
AGTCATCAAC CATGAAGTAT CGCTTTTCGG TAATGTTCAC CGACAGTCAG GCCGTTCCAC
AAAACGCTCA CATTGATTAC CAATGGGATG ATTTGGACGG ATCAGATCCC ATGCCGTATC
TCGGATTTCT ACCGTTGACG AAAGCGGGTA TGTTTTTACA ACTGTGGACG GGTAATCCGG
ATGACGGTGT GATCAAAATG GGGAACATCG TGTTTGTACC GTGGGGAAAG TTGCTCTTGG
TTCCGGGCAA CACGGTCCAC GGCGGGGGCT TCCGTACGGG TAATCACGGC AATTTACGGG
CGCACTTTTA CATTCACTTT GGCGTCCTCA AGGTCAACGC CAACAATCAC TACAAGAATC
GGTACGGGTA CGATCTTTCC TTGACGCATC TGCACAATCC ATCCAACGAT TTTAGCAAGT
TTTGGAACTA GATGAATGGA ATTGCTGTCG CAATCGCTAC GCAAACAGAT TGAATAGATT
TTCCCTGGGG AGAAATTTGT AAAATATAAG CTTATGCTCA TTTTTTG
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| Protein sequence | MATVDPGELA WRRRWAKAFP TLVPHLMDVG PSPATLPVPI TKLPYPEEFT ATTDNMDHLW
WQRLAWRTFW DEYTDDRSLP DVASDDCIPN INSNSNNTVS NANINNITGL PPEDPPSVLR
NIATWNQSLG YGEITAEATW TLVRTIQPYL PSSQSLTAVD LGSGNGKVLL AAAFAYPFRK
LVGLELLPGL HEDALRYQAY WQQRWKGTAA SNTTIPTTLG AAAISTTTTV SNLDPSTLAT
KSSETGALSP AVLEFYCDDF TNSPNVDWIH QADVVFCHAT VFQTKLLERL QVCCEQTREG
TLFCMVTKPL QCNARIETLA EIRLDMSWGR AAVYVQRRRI HHRLPPTETA TDLSLNVTTT
TVSTTSPNDQ SAPQATELRA NADSSDRGTN CTRHSMASQK RPMPTSSTET AVAQKKRLVA
DSEATLAESA LSLNEVPETM ESPPHLVSFE APCPRGEPRE EKVCSTVARP IGDEYRILHL
DDCPDLIHQV GGAVLTCPPD LESMLWEMGD SVPDPTKLTG QQQYNRVSGK SSMSVRYRMY
DGSNLQQSFA ASSNTRTEKQ FLARCGPSLD LFDAVLRQFV LEQKFCKSWH ESSTMKYRFS
VMFTDSQAVP QNAHIDYQWD DLDGSDPMPY LGFLPLTKAG MFLQLWTGNP DDGVIKMGNI
VFVPWGKLLL VPGNTVHGGG FRTGNHGNLR AHFYIHFGVL KVNANNHYKN RYGYDLSLTH
LHNPSNDFSK FWN
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