| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47504 |
|---|
| Symbol | |
|---|
| ID | 7202281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | + |
|---|
| Start bp | 832197 |
|---|
| End bp | 834751 |
|---|
| Gene Length | 2555 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181634 |
|---|
| Protein GI | 219122609 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.467202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTTG TACGGAACAC CGCCATTCGA CAATCGCTAC TCTTCCCTAC ACAAGCCTTT
TTCTCCGGCA CCAGGCTACC GTCGTCCATT ATGGAGCGGT GTCGGTCGTT GAGGATCATG
ATGGTGCTGC ATCTAATTGT ACTGGTAGTA TTAATGAGTG CACCAGTGAA TGCTGCCGTC
TTTCCCGGGC ACAGCAGCAG CAGCACGGCA CCGTCAACAA CAACAAAAGG GGCGACAACG
ACATATATTC GTCGAGAATT GCAAGAGGAG AAAAAACAGA GCATTGTACA ACAATACGAG
CTATGGGAGG CGGAAGAAAT CAGTTCCCAG ATACAAAAAT GGGCTTCCCA CTATCCCGAT
CTACTCCGCG TCACTACCTC GCAAGAAGCC TACGGCTTGC CTCGAGCCGG AGGGGCCGAC
GATTGTCCGT TCGACAAGGG CGGCGACGGT TGTCTGAACT ATATACTTAC ACTACAAGAC
TTTGTGAAGC ATCCGGAGGG ATCGGCGACG TCCAATCAGC TGCCGGAAGT CCTCTGGAGT
GGTGAAGTCC ACGGCAACGA ACGGGTCGGC CCGACCGCCG TACTGGAAGC CGCACAGCTT
CTCATGGAAG CGGCTTCGTG CATCGCACAT CCCCGGGTAG CACTGCGAGA TAATCCCAGT
GCCTGGAAGC TAGAATTGAC CAAAGCACGC TCGTGTCGGG AAGAAATGAA GCACATGGGC
CTGGATGAAA GCCACATCCA GTGGTTGGCC CGCCTTGTGT CGACTCGACG GATTGTGATT
ATCCCGACCG CGAACGCACT CGGGTATTTC CGTAAAGTGC GCGAAGAAGG CAATGTCGAC
CCGAATCGAG ACTTTCCCTA TGATTTGACT GATCCCACGC TCTGCATGCA ATCAGTTGCC
GCCCGGACTT TGAACGAGGT CTATCGGGAG CACTTGTTCC AACTTGCCCT TACCTTTCAC
GGTGGTATGG AAGCGATTGG GTATGAATGG GGGGCTCCAA CTTGGAAATC GAAAAAATCG
CCGGATGATT TGGCACAACA AGAGATCGCC GACGCGTACA GTCGCTACGC CGGGGGATGG
TTCGGAACGC GAAACTACCA ATACGGCCCC ATGAACGATC TGGTGTACCC CGTGCGTGGT
GGGATGGAAG ACTGGGCCTA CGCAGGCTCC TGGGATACTG ATAGAGTCAT TGCTTGCCGA
CCCACTACAT TTGGGGGCTA CCCAGAAGCC AAGACCGTCT ACGACAACTC CACTTTACGG
GTCTTTAATA TGCTGGTGGA AACCAGCAAT GACAAAACTC CGCTCAAGGA TCAACTCGGC
ACATCCTTGG ACGTTTTGAA CTCTGATACT ACCGGTAACG GCCACGTGTC CCGCAACATT
CGATTGGCCT TGTTATCGGC GGATTTGGTA CAGCCTTATG TGACACTGCA ACGAGTGAAC
GACTTGCACC TGTCCGACGA TGTAGTATCG CTCTCACGAG AGGATGGTCA CAGTTGTCAA
GGTACACGCA CAGTGACGAT CTCCTCAGAA CGCCCAACGG TCACGTTGGA GTGGACGGTT
GGAGGGGCAC TACAAACCCA TGAGACACAA GTGTTTTACG CCAAATGGAG CGATCTTCCC
TTGGAAAAAC TCGACTGTGT GAACACACCG AACATTCAAG ACGTGGAAAG TCTCATGATT
GAAGGAACCA TGACTTCAGT TACGTCCGGT ACCAACCATT TCGCCGACGC CAAAGCGACC
ACGTTCAAGT CGACCATCGA TGTGCAAAAC TTTCACGCCC ACGACAAGAT TGTGGTTATT
GTCATGGCCA CGGCTGATCA AAATTGGCAT ACACAAGATC CCAAGGACGC TGTTGGTCCG
GAGAATAGTC CACCTCAATC GCACATTGCC AACGCCCGCA TCAATGCGGA TTGGTACTTT
GCCAAAGAGA ATGGCAAAGT CGTTCAGGGC CGCCGCGAAT GGTTTTCCCA ACCTTTGACT
ATCGAGATCG GTGAATTCGC CACCAATGGC ATGGGCGCCC ACGGAAGCCT CGTCGTCGAA
ACCTTCGAAT TGTCGAATCG CCTCGGGGAA ACGACGGGCG GCGGTTTCCC CACTGGTGGT
GTGCGTCCCA ACGCGGGCGT GTCTCCCGGT ACGATACAAC CACGGTCGCT GTTCCGAAAG
GTCGCCGCCG TTGGTATGCT GGTATTTGCA GCGATCGCTG TGGCATACGG GGGGCGGCTC
TACCTACGGA ACAAAATGCG GTCCAGTCGA CGAACGCAAA TTCGTAACTA CATTCAGGAC
GAAAGTGCAC CGAGTCCGGG GTTGCGCGAT ACAGCGCGTG TCAACGGTGC CAGCAAGAGT
GGATACGTTC GCTCGGCATT CCGAGACGAT TTGGATCTCG AAGAAGAAGA TCCTCGACGA
GAGCAAAGAA GCGAAGTGGA ACTGGGACAG TACACTTAGT AGGTCCACTA CTTACCGCGG
CAAACGGCAA AACCTAATCT GATTTGTCAA ACATCATAAA TTGTAGTCTA ATCCATGAGA
CACTTTTGAT CGCAACTAGC CAGAGTAATA CATTT
|
|---|
| Protein sequence | MGVVRNTAIR QSLLFPTQAF FSGTRLPSSI MERCRSLRIM MVLHLIVLVV LMSAPVNAAV
FPGHSSSSTA PSTTTKGATT TYIRRELQEE KKQSIVQQYE LWEAEEISSQ IQKWASHYPD
LLRVTTSQEA YGLPRAGGAD DCPFDKGGDG CLNYILTLQD FVKHPEGSAT SNQLPEVLWS
GEVHGNERVG PTAVLEAAQL LMEAASCIAH PRVALRDNPS AWKLELTKAR SCREEMKHMG
LDESHIQWLA RLVSTRRIVI IPTANALGYF RKVREEGNVD PNRDFPYDLT DPTLCMQSVA
ARTLNEVYRE HLFQLALTFH GGMEAIGYEW GAPTWKSKKS PDDLAQQEIA DAYSRYAGGW
FGTRNYQYGP MNDLVYPVRG GMEDWAYAGS WDTDRVIACR PTTFGGYPEA KTVYDNSTLR
VFNMLVETSN DKTPLKDQLG TSLDVLNSDT TGNGHVSRNI RLALLSADLV QPYVTLQRVN
DLHLSDDVVS LSREDGHSCQ GTRTVTISSE RPTVTLEWTV GGALQTHETQ VFYAKWSDLP
LEKLDCVNTP NIQDVESLMI EGTMTSVTSG TNHFADAKAT TFKSTIDVQN FHAHDKIVVI
VMATADQNWH TQDPKDAVGP ENSPPQSHIA NARINADWYF AKENGKVVQG RREWFSQPLT
IEIGEFATNG MGAHGSLVVE TFELSNRLGE TTGGGFPTGG VRPNAGVSPG TIQPRSLFRK
VAAVGMLVFA AIAVAYGGRL YLRNKMRSSR RTQIRNYIQD ESAPSPGLRD TARVNGASKS
GYVRSAFRDD LDLEEEDPRR EQRSEVELGQ YT
|
|---|
| |