| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47492 |
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| Symbol | |
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| ID | 7202596 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 766577 |
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| End bp | 768928 |
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| Gene Length | 2352 bp |
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| Protein Length | 640 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181625 |
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| Protein GI | 219122591 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00475484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTAGCAGCAA CCCTGTCTCG CGACGAACTC TATTTCACCT GTCATTCACT GTAGTCATTC
ACACGGCTTT GGTCTTTTTG TGCAACCAAC GAAAAACGAA CCAAGTGGAG GCGGGAAGAA
GGAGACCTTT TACATACCGT TGGGCCGGGC CATTGAGACC AGGGATTGAC TGACTGCGAG
TGTTATTCTC TCTCGTTTTC TCACACACAC GCACACATAC ATACACACAC AATCACACAC
ACATCCACAG TCCATCATGG CGCTCGGTAC ACGATCCAAC CAGACACTAG TGGTTGGTTT
GGCGGCTGCG GCGACCGCTA GTCTCTTGTT GTACTACGTC GTGCAAGCCC GGACCCGACC
AACTTCGGAT TCCTCGCCCC GCGACACCAC CGATCGCAAG TCTCGATCGG TAGAATTCAC
CACACCGTCA CCGAAAAAGA CCTCCGGGCC TTTAACGAAG GCGGTCGGGA AAGGAGAAGC
AGCGGACGGA TCCGAGGACC AGACACCCAT TGTGAAGAAC ACGGCGAAAG ACGCGGAAAA
AGAAGTAAAC GCCAAAATTG AACTCTTGGA CAAGAAGGGG AAGGATCTCT TCAAGAACAA
ACAGGTACGT AACAAGGAGG AGTAAGAAGA AAATAGAGGC CAGATCTTTC CAAGTGGGAC
GAGACAACTC CTCGATACAA CCAGTGCAAT CCTCCCACTC ACCCCCGTTC CCCAACACTA
TTTCCTTTGG CAGTACCTCG ATGCCGCGGA AACATTCACG GAAGCGCTCA CGCTCATTGA
AACCAGCGAT ACGAGCGGTT CCGTCCAGAA CACATCGTCC TCTTTGCATC GCCAATTGAT
TACCTTGCTC AACAATCGCT CCGCCATGTA CGAAAAAGGC AACCAGCCCG AATTGGCCCT
GGAAGATTGC ACGCAAATAC TCGACCAGGA TGTGCATCAC GCCAAAGCCC GCACGCGGAA
ACTCCGCGTT CTGGAAAGTC TCGGTCGTTG GCACGATGCA CTCGTCGAGG TCTGCGCCGT
GCAGCTTTTG TTTATGCGCA AACACCGGGA CAGCATGCGA CTCGGCTTGA AGGTACCGCC
GCCTCCCGTT CCCGAATCCA AAATGCAAGA AATTCTCACC AACGTTGTGC CGTTGGAAAT
GGAACCCTAC ATCCAAGCGC TCAACGAAAA AACCACGCGA CCACTGCCAT CGGGCTACAC
GATCCTGCAA TTGCTCCGCT CCTTTACGTC CTACAATAGC TGGATGGCGC AAGCGGCCAA
AGACGGCAAC GTCGCGAACA TTGACAAGGA GTTGGTGGAA GGCGTGGATG CGGCGAGTAA
AGCACAGCGC GTGCACGTCC TACTGAAACG CGGACGCCGG CACGTGTACG ACCGGGCTTT
TGAAAACGCC AGTGACGATT TCGAACAAGC CTACGCTCTG GCCGAAACCA ATGAGGTGCA
ACTATTGTTG GAAGGAGACG ACTACGCTCG CGTGTTGGAA TGGACGGGCA TGGTCAAGCA
CTGGCGATAC AAGCTGGACG AAGCCTCGGC TTGTTACGAA AAGTGTGCCG ATCTAGAGCC
GACCAATGCC TTGGTGCTGG TAAAGAATGC CGGAGTCAAA ATGGACGGTT CCCACCAAGA
CGAAGCCATG AAACTGTTCG ACACTGCCCT GGGACTCGAT CCGAAAAACG CCGACGCGCT
CTTGCACCGT GCTAATCTGC GACTGTTGCA AACCAAGCCA GACGAAGCCA AGGAAGATCT
GGAAGCCTGC ATTGCGGTGC GACCCGACCA TATTATGGCC CGTCTCCGAC TGGCGTCCAT
TTTGGCCGCG ACGAACGAAG CGGCCAAGGC GAAAAAGCAC TTGGACGCGG CCGAAAAAGT
GGAGCCCAAA TCGTCCGAAG TGCAATCGTA CCGAGGCGAG CTACACTTTA CGCAAGGAGA
ATTCGACCAG GCCCGTGCGC AGTTTGAAAA GGCCATTGCG CTGGACCCCA CCAATCCCAC
TCCGTACGTG AACGCCGCCA TGGCTATTTT GCAGACGCCA CCGCCGCCGG GACAAATGCC
GGATGCGCAG GAGGTAATTC GTCTGTTGGA AGAAGCCATT CGTGTCGATC CGTCGTTTAC
GTTGGCGTAC ACGCATCTCG GCAACGTGAA ACTTGGAACC GCCACGGAAC TTTCCAGTGC
TCGTGAAGTG GTGACGCTGT ACGACCAGGC ACTGGCCAAC TGCCGATCGG AAGAAGAAAT
CAAGGAACTG TGCAGTATGC GCATTCTAGC GGTAGCTCAA GTAGAGGCAG CCAGCATGCT
GAAAATGGAA TCCTTCAACA TGCAATAGAG CGTACGAGAA CAGTCATTAA GCAACTACTC
GACGAGGAGA CT
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| Protein sequence | MALGTRSNQT LVVGLAAAAT ASLLLYYVVQ ARTRPTSDSS PRDTTDRKSR SVEFTTPSPK
KTSGPLTKAV GKGEAADGSE DQTPIVKNTA KDAEKEVNAK IELLDKKGKD LFKNKQYLDA
AETFTEALTL IETSDTSGSV QNTSSSLHRQ LITLLNNRSA MYEKGNQPEL ALEDCTQILD
QDVHHAKART RKLRVLESLG RWHDALVEVC AVQLLFMRKH RDSMRLGLKV PPPPVPESKM
QEILTNVVPL EMEPYIQALN EKTTRPLPSG YTILQLLRSF TSYNSWMAQA AKDGNVANID
KELVEGVDAA SKAQRVHVLL KRGRRHVYDR AFENASDDFE QAYALAETNE VQLLLEGDDY
ARVLEWTGMV KHWRYKLDEA SACYEKCADL EPTNALVLVK NAGVKMDGSH QDEAMKLFDT
ALGLDPKNAD ALLHRANLRL LQTKPDEAKE DLEACIAVRP DHIMARLRLA SILAATNEAA
KAKKHLDAAE KVEPKSSEVQ SYRGELHFTQ GEFDQARAQF EKAIALDPTN PTPYVNAAMA
ILQTPPPPGQ MPDAQEVIRL LEEAIRVDPS FTLAYTHLGN VKLGTATELS SAREVVTLYD
QALANCRSEE EIKELCSMRI LAVAQVEAAS MLKMESFNMQ
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