| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47463 |
|---|
| Symbol | |
|---|
| ID | 7202580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | + |
|---|
| Start bp | 689202 |
|---|
| End bp | 690109 |
|---|
| Gene Length | 908 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181612 |
|---|
| Protein GI | 219122564 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AACTGCACGT CAGATTGTAA ATGCTATAGT CCTTGCAAAG AGAAACATCA CAATGGGACG
AAAAAAGCGC AAGACGACCG ATACGGATGC AGCCGCTGAA GAAGAGGCCG CAGCAGCGCA
GCCCAACGAA TTGGTGACTG CTTCGGCGAC GATGCCGCTT GCGTCAACAA TCAAGACACC
GACTGGTACG CAAGCCTTAC CTGCGGCTTC TAACTACGCG ATGACGTCTC ATTCCGGGGA
AATTGTGCAA GAAGGTACGT GTGTGGTAAC ATTGACGGAT TAGCGTTCCC TCGTCGTTTG
AATCAAGGAT TTCTCTTTCT CACTCGGTGA GAATTGCGCG CGCCTGTGTG ACGCTTCAGA
TGTGTACGTC TCGGACGGAT CAGAGGACGA GCTCGAAGAT GTGGACGTCG TGTTGAGTGG
GTCACGAATG GGGCTCATGC GTCGCGGATT GGTGCATCCG TCGGCGTTGC TGCAGCCGAA
TCGACAGTGG ACGAGAAGTG ACGCCGCCAC GGCGGTCGCC GAAGGCGAAG CCTTCACGGA
AGACGAGACA CGGTTACGAC AGGAGGAGGA ATTGGCGAAA CTAGATCCCG CCGAACGCGC
GGCTCGACTA CAGCAAGAAA AATTACGCAA AGAAGAGGAA GCAGTTTTAA CGGAGCGACA
AAAAGAGAGT GAAGAGAACG CCGGTCGTGA TCCGGCCCTC TTCTCCAAGA GAACGGCCTT
TGATATTCGC TTTGATCAAA TTGAGGAAAA GCCTTGGGCT CGTGGCACTG GAGATTTTGC
AGACTTTTTT AACTACGGTT TGGCGGAAGA AGATTGGTTG GAATACGCAG AGCAGCAAAT
GATGATTCGA CAGGAACTCA TTGACGCGAG CAAGCAAAAG AGGGCTCCGG ACCCCACGAT
TGTTCCGG
|
|---|
| Protein sequence | MGRKKRKTTD TDAAAEEEAA AAQPNELVTA SATMPLASTI KTPTGTQALP AASNYAMTSH
SGEIVQEDVY VSDGSEDELE DVDVVLSGSR MGLMRRGLVH PSALLQPNRQ WTRSDAATAV
AEGEAFTEDE TRLRQEEELA KLDPAERAAR LQQEKLRKEE EAVLTERQKE SEENAGRDPA
LFSKRTAFDI RFDQIEEKPW ARGTGDFADF FNYGLAEEDW LEYAEQQMMI RQELIDASKQ
KRAPDPTIVP
|
|---|
| |