Gene PHATRDRAFT_47462 details

Gene Information

• Locus tag: PHATRDRAFT_47462
• ID: 7202579
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 683345
• End bp: 685594
• Gene Length: 2250 bp
• Protein Length: 491 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002181611
• Protein GI: 219122561

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.28983
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCTTCCTTG TGTATCGCAC AAACGCTTCA AATTGAAATA TACCACCACC GGAGCATCAA 
TCGTTACACT CACATTCACA CACACCCAGA GGGAACAACA ATATTAGGGA CAAGTAGAAA 
CATTCTGTAG TGGCATCATG AGACACAGCA ATGGTCGGGG GGTTCCCGCT GAGGAAAGCG 
AATTGCGGAC ATCGCCGGTG ATCAACCGGA TCCGACCCCG CCGTGAAGCA CAAGCCTACC 
GCATCGCCTA TTCGTGTGAG CACGCCGCGC GCATTTTCCG GAGTACTAAA CGGCGCATTC 
GATGGTAAGT TTAAGTCAGC ATTGTTCTTG TCGTTGGGCG TGACCTCGAG TTTGGCCTAG 
TCGTTCCTGC ACCATCGCAC CATGGTGGAC CCCGTCCGAC ATCGATTACC GATGCTTGTT 
CGGAGTGGGC TTGCTAATTT TCATCGACGG ACACCCGTTC AATATTTTTC TGTCTTGGTT 
CTGTAATCGA AAACAGCTTT GTTGTTTATG TATTTTTGAT AAGGTATACA GTCTTGTTGA 
TGAATATAAC AGTTGGGACA TGAACTTTCC GTTTTGACCT GGGGTATCTA GACACTTCAC 
GTGTCCTCGT GTTCTTGTGT GGGAGGGGCA CAGCTTAGCC CTTCCAATCG CGCTCGGGAC 
CCCGTCTTAT ACTTATAGCA GCCCTCTTCC GATGGGCCGA CCATGATGGA ATCACACATG 
GTAGTCACCG TTCGCCAAGC TTTCCACTCA CCGAGTCCCG TCCTCTCCTC GCGTCACAGG 
TCATTCGGGC TTACCAACGT GAATGCTTTG CGAGACGGCG GTAAAGGCTT GGACTGTCGG 
GGGGAAGAGC ACGCCGTCGA GCTGGTTTGG AGCGTTCGCA GCGGAAAGAC ACGGGTTTTC 
TGGAACGGAA GGGATATTTC GAATCTGTTT CGGGGCGGGA ATCGATCCGG AATGGTCGAG 
TTTGCTTGGA ATACTCGAAC GGAGGAATCT CTGAGGATCG TCGCCCACGC GGAACCCCGT 
CGAGGAGTCC GGCAATACGA TCTGTTGGTG GACGGAATCA GTGTTTTCAA CCTGCCCAAG 
TTGGCCGAAA TTGGACAACC TTTGTCGGCC ACTTCAACCC CGTGGGAGCT TCCCTTGGAC 
ACAAGCCACG AAACCGAGTC CCGATCGCCA CGGTCGTCTC CGATACCGGT GCACACGATC 
GACTGCATTG AATCGATCGA TAGCATGGAG CACCAGACTT GGACGGATGC CGATCAGGCC 
AAAGCTCGGC TCGCGAGTGT TGGTCTAGCG TTACATCCAG ACACTGAAGA GAGCGACGAT 
TTGCACTCGG ATTTGTACTC GCCCATCGTT AATTCGATGC GCAACCTGAT CACGGCGCAC 
CTACCACAAA CGGAGGAAAC CGTCTCGCGG GCGTTTACGA ATGCACTGAT CAAGGATAGT 
GATTCGTATA CGAGCGAATC GTCCCTTTCG GATTCGAGTT GTCTTCACGA CGCGATGCAA 
ATTGAAGTCA ACGCGCTATG GGAAGCCTTC CGGTGGGTCA GGTCCAATGC CGATCAAATC 
ATGTTTTCGG ACGGCGAGGA GTTACAGCTC GAGTACATGC GTGAGCAAAT CGAAGCGGTG 
TTTGCCAAAG TATGTCACGA ATGTTTGACA CCGGGAGAAG CTTCGCGTAT TCTTTTGCAC 
GTCGGTGCCA TTCTTGGTCT CAAGTTTCAT CGCAATATTC TCATGGATAC CATTCTCGTG 
GACGGCTTGT CCAATTACTG CACCGTAAAC GACCTGGAAG CTGCGTTACG GCCGTTTGGC 
CGGATCGTTT CGATTGCCAT GGTCCAGGGA CATGGTTTCG GATGTTGCCG ATTCGTAGAC 
GACGGTCCGC TGCTGCGGTT ACAACGGAGA GGGCTTACGT TTACGATTGC CGGAACGAAA 
GCGCAAGGCA TGGTCATTTC TAGTCTTCAC GAATTCAATA CCAGCACACG TTATTCTCAA 
GGAGAGAACG GAGAGTTTTC CGAAGAAGAG CATTCCGACC AGCCTACAAT GCAGCGGACT 
TCCGCTTGTT CTATCCATGG CGAAAGGAGG AATTCTTGTG GAGTACCAGT AACACCGATG 
TCCGAGCAAA GTGTTCGAGA AATGATTGAC TTTGGGGACC AACATCAGAT CGACACCTTA 
GACTTTCTTC GGTCGCCCGA CTCGGTTACA CGAATGACAT TTGGTCCAGG CATCATGCCA 
TCGAGTCTCA CCGCTGCTTG TCTGGACTAG 

 

Protein sequence

MRHSNGRGVP AEESELRTSP VINRIRPRRE AQAYRIAYSC EHAARIFRST KRRIRWSFGL 
TNVNALRDGG KGLDCRGEEH AVELVWSVRS GKTRVFWNGR DISNLFRGGN RSGMVEFAWN 
TRTEESLRIV AHAEPRRGVR QYDLLVDGIS VFNLPKLAEI GQPLSATSTP WELPLDTSHE 
TESRSPRSSP IPVHTIDCIE SIDSMEHQTW TDADQAKARL ASVGLALHPD TEESDDLHSD 
LYSPIVNSMR NLITAHLPQT EETVSRAFTN ALIKDSDSYT SESSLSDSSC LHDAMQIEVN 
ALWEAFRWVR SNADQIMFSD GEELQLEYMR EQIEAVFAKV CHECLTPGEA SRILLHVGAI 
LGLKFHRNIL MDTILVDGLS NYCTVNDLEA ALRPFGRIVS IAMVQGHGFG CCRFVDDGPL 
LRLQRRGLTF TIAGTKAQGM VISSLHEFNT STRYSQGENG EFSEEEHSDQ PTMQRTSACI 
MPSSLTAACL D