Gene PHATRDRAFT_47448 details

Gene Information

• Locus tag: PHATRDRAFT_47448
• ID: 7202470
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: -
• Start bp: 645816
• End bp: 647984
• Gene Length: 2169 bp
• Protein Length: 692 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181774
• Protein GI: 219122899

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.445648
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTGTCTGA CCACCTCTTC TGTCAATGTG ATATGTAATT TTCAATTTGT TGTCGCCCCA 
GAAACAGCCT TCGTTCGGAT CTAGCACGCA ATGGCCGAAC CGCAACTCTT TCTGGCTTCT 
CTGGTATGCA TGTACCTCGT TCTGCGCGTT CAAGGCTTCT TCATTCGGCC CTCCTCTCCA 
CCTTCGTTTC CTACAACAAT CTTCAGCCGC TCTTTCTCTC GCAATCTTTC ACTCTACGCC 
AACTCCGAAA AAATCAACGG GGAAGATCCT AAGTCTCGTG GTGACAGCAA GAAGAAAACG 
AGCAAAGAAC CCAAGACGGG TTGGACGCAC AGTACGCCGG ATCCCACCTC TGACTTTTGG 
GAGCCTGGTC CTGAAAGGCC AAAACCCGAC GAAGAGCCGA AAAAGCTACG GACGGGGTGG 
CTGCACAACG CCGAGTCAAA AGAAAAGAAG TCTCTCTCTG TTACGGACGC TTCCGGGCTT 
CCGAATTCGG GAAAAACTGG TGGATTTTCC GAAGCCCAAC GCCGGTTGCA ACTCGCCATG 
AGACAACAGG AACGCAATCA TCGCATCATC GCGCCGCCGA CCCTACACGC GTGTGGTACA 
GATTTTCCCA TTGTGATCAC TGAACACAAA ATTTCGCTAC CTCTCAGTCG AGTAGAACCG 
CCTTCCCGTT TGGACGTCTA TTTCACTATT GTTGAAAAGG TACGGTCGGA AAAGGATAGA 
AAGTGGTTTG CTGGTCTCGC ATCCCGATCC CCCCAGCAAC GCGCGGGTGA TTACGTAGCG 
TTTGCTAACA TGGAAACGGC AACCGACATG ATCCTCTACT TACAAGGAGG TCCTGGTTTT 
GGAGCGCCAG TACCTGTTGC AAGTCTTGGT CTCGAGAAGG ACAGCAGCTG GGCGGCAAAG 
GCCTTGGAAA TGTACACACG TGTTGTCCTC ATGGACCAAC GAGGAACGGG TCAGTCCACG 
CCAATCACAA AACAGACTCT TGAAATAAAA TTCCCAAATC TTTTTTTGCT CGATTCAAAA 
GAAACTGTTA ATCTCACTCT CAACGAGCTG GAAGGAGAAG ATGCTGCTTT GGTAAAGCAA 
GCAGTTTTGG AGGCCACCTC TTACTTGTCT CATTTTCGAG CCGACAATAT CGTTCAAGAT 
GCGGAGGAAA TTCGAGATGC GCTCTTGACT CCGATAGAAA CCGATAACAT AGCTCGACCG 
TGGGGTTGCT CGCTGGGACA ATCGTTTGGC GGGTTTTGTT TAATGACCTA CTTATCTCAG 
GTTGCGCACC CTCCGCAACT GTGCCTTTTC ACTGGAGGAA TAGCGCCGAT ACTGACGCAG 
ACCTACGATG TGTACGCATC GTTGTGGGAG CGTGCGAAAG AGCGCAGCTT GCTGTACTAT 
GATATGTACC CCAGTGATAT TGTTCAGGTC AAGAAAATTG TCTCGAGGCT ACTGGTTGAA 
CCGGTTTCTT TGCCATCCGG CGGCAAGCTA ACTGCGCGCA GGTTTCTACA GCTTGGGTTG 
GCACTGGGGG GATCGCCTAC CAGCTTTGCT CGTCTACATG CTCTCATTAA CTCGGCATTC 
GTTGAAGGTA CAGATGAAAG TGCGCTAAAA TTTCGTCGGA CGTTTCTTAA AGAGATTGAC 
TCTGAACAGA ACTTCGATGA TGCACCAATC TACTTTTGGC TGCACGAGAG CATATATGCC 
AATGGTAAGA ATAACTCGCC AACACATTGG ACGGCTCACC GTGCTTACGA GGACAAGGTG 
AAGAGTCAAC CTGATTTCGA TTTCGTACAG ACTAGCACCA TACTTTCAAC CGACCAGCCG 
ACGCTTTTCT TTTCCGAAAT GGTATTTCCT TGGATGGCAG AAGACTACGC AGAACTGAAG 
GGAGTGGGTC TAAATGCCAT GGCAAATGAT TTGGCGGCGA AAGAGGATTG GGGAAAATTA 
GTTGAGGAAG ATCAAATGCG AGAGGTCCTC AGCGACGGTC GATCTACAGC TGCTGCAGCA 
GTCTACTACG ATGATCTCTA TGTCGATTTT GATAGTTGCA TGAAGGTGAC GGCACACGGT 
GGACCTCTGG AAGCTTGCAA GGTTTGGATT ACCAACGATT ATCAGCACTC GGGACTACGA 
GACGACGGAG CGCTCATCTT TGCAAAACTT CACGGAATGG CAAATGGGTG TATCCGCACG 
CCGAGCTAA 

 

Protein sequence

MAEPQLFLAS LVCMYLVLRV QGFFIRPSSP PSFPTTIFSR SFSRNLSLYA NSEKINGEDP 
KSRGDSKKKT SKEPKTGWTH STPDPTSDFW EPGPERPKPD EEPKKLRTGW LHNAESKEKK 
SLSVTDASGL PNSGKTGGFS EAQRRLQLAM RQQERNHRII APPTLHACGT DFPIVITEHK 
ISLPLSRVEP PSRLDVYFTI VEKVRSEKDR KWFAGLASRS PQQRAGDYVA FANMETATDM 
ILYLQGGPGF GAPVPVASLG LEKDSSWAAK ALEMYTRVVL MDQRGTGQST PITKQTLEIK 
FPNLFLLDSK ETVNLTLNEL EGEDAALVKQ AVLEATSYLS HFRADNIVQD AEEIRDALLT 
PIETDNIARP WGCSLGQSFG GFCLMTYLSQ VAHPPQLCLF TGGIAPILTQ TYDVYASLWE 
RAKERSLLYY DMYPSDIVQV KKIVSRLLVE PVSLPSGGKL TARRFLQLGL ALGGSPTSFA 
RLHALINSAF VEGTDESALK FRRTFLKEID SEQNFDDAPI YFWLHESIYA NGKNNSPTHW 
TAHRAYEDKV KSQPDFDFVQ TSTILSTDQP TLFFSEMVFP WMAEDYAELK GVGLNAMAND 
LAAKEDWGKL VEEDQMREVL SDGRSTAAAA VYYDDLYVDF DSCMKVTAHG GPLEACKVWI 
TNDYQHSGLR DDGALIFAKL HGMANGCIRT PS