| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47431 |
|---|
| Symbol | |
|---|
| ID | 7202560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | + |
|---|
| Start bp | 606449 |
|---|
| End bp | 607841 |
|---|
| Gene Length | 1393 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181595 |
|---|
| Protein GI | 219122528 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCTTTGTGAA AAGTCATGGT GCATATAAAA CACACTATTT CACTTTGGCT GATACTGGCG
TCATCGTTTG GAAGCGATTG TCTATGCCGT GCCTTTGTTC CGAGAAGGGG CGATCTTGTG
TTAAAGTCTT ATAGTGTGCA TTCGCCACAA CTCAATTTCC AGCGCAGCGC CCTCTCTGTG
CTTCCAGTAA CGGAACTAGA AAAGATTAAA AGAGTATACT GCATCTCTGA TCTCCATACA
GACCACATTG ATAATTTGAA ATGGTTGCGA AACCAAGTTT CTGGTTCAAG CCTCAAAGAA
ACTGACCTTG TTGTTGTTGC CGGTGATATT TCACATGAAT ACAATCGCCT TACCGAAACC
CTTCAAGTTT TGCGCCAGCG ATGTCAAGTT TTCTTTATTG CCGGAAACCA TGAAGCCTGG
CTCACAAAGG AGGACCCTCG GTCATCCATG AAAAAGCTGC AACTCGTCGA AGCGGTCTGC
GAGAAAATAG GTGTGCACAC CAAGCCAATT TATGTAAACG GAAATTACCC TCTGTGGATT
GCTCCTACAC ACTCGTGGTA CGATGGAACG TTATCTTTTG ACGAAATTCT CAGCAAAGGC
TTTAACGAAT GGCCGTGGGT TGACTTTGTG CGTTGCGAAT GGTCTCCAGA TCGGTTTCCA
GCATTTCCAA AGTCATCAGG ACGGGGAAGA ATACCACAAG GCTTAGTCGA ACATTTTCTT
GAATTGAATG AACCCTTCCT CCAATATTTA CAAGAACAAA TATCCGCTGG GGAAGCTGTC
CTGACGGTTT CGCATTTTTT GCCCAATAAA CAATGTCTTC CAGATTGGTG CGACTTGAAA
TCTTCCAGTT TCGATGCAGG CGGGTGGCTC GATCACGGTG CAGGCGGCAT GAGCGCCAAA
TTTGCCAAGG TTGCAGGGTC GAAACTTATT GACAACCAAT TGCGTTCTTT AAAATTACCA
GGGGCGACAA AACATTTGCA TTTGTTTGGG CATTCCCACC GTCCGAAGGA CTTCACGTTT
GATGGTCTCC GTTATATCCA CAACCCTCTT GGCAAACCAA GAGAGCGAGC CTTGCACATG
ATATCTCCAA ATGTCAATTT TCAACTTCTC TGGAATACAA AAACGGGAGA GGTAGCGGGA
AAGCCGGTGA TTTGTTACTG GGAGGAAGAA GGTGGGGGTG TTGAGAAACT TAGGGAAAGA
CTTGAAAAGA ATCGGCAGAA AGTTTCATCC AGGCAATACA AGGACGGTAT TTAGATGGAA
TAGGAAGATT CACTGTCAGT TGTCTTGAGA AGCAGCAGAG ATGAAAGCAT TAACAGTCAC
AAGCACATCA ATGAGCTCAG AAAAGATGTA AATAAACCTT ATTTGTGCTG ACAAACTTGC
AAAGTGAAAT GCT
|
|---|
| Protein sequence | MVHIKHTISL WLILASSFGS DCLCRAFVPR RGDLVLKSYS VHSPQLNFQR SALSVLPVTE
LEKIKRVYCI SDLHTDHIDN LKWLRNQVSG SSLKETDLVV VAGDISHEYN RLTETLQVLR
QRCQVFFIAG NHEAWLTKED PRSSMKKLQL VEAVCEKIGV HTKPIYVNGN YPLWIAPTHS
WYDGTLSFDE ILSKGFNEWP WVDFVRCEWS PDRFPAFPKS SGRGRIPQGL VEHFLELNEP
FLQYLQEQIS AGEAVLTVSH FLPNKQCLPD WCDLKSSSFD AGGWLDHGAG GMSAKFAKVA
GSKLIDNQLR SLKLPGATKH LHLFGHSHRP KDFTFDGLRY IHNPLGKPRE RALHMISPNV
NFQLLWNTKT GEVAGKPVIC YWEEEGGGVE KLRERLEKNR QKVSSRQYKD GI
|
|---|
| |