Gene PHATRDRAFT_47420 details

Gene Information

• Locus tag: PHATRDRAFT_47420
• ID: 7202554
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 584337
• End bp: 586705
• Gene Length: 2369 bp
• Protein Length: 514 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002181588
• Protein GI: 219122513

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGTGGCATCA GTGACCAAGG CCTGTAATTG GAACGCGCCT ATGTCTCTCA CAAGCACAGC 
GGAGCAACTT TCTGATGAAG AATTACGAAA GTGGTTGAAA CCGAACGTAA CGGAAGAAGA 
TGCCTTGAAA GTGCTGGACG CCTCTTACGT TCCTTCCTCC GGCAGCCAGC ACCGGCGGAT 
ACTGAAACAG CTCGATAGTT ACGACGACGC CAATTTCTGG GTCGAAATAA ACAACGTACA 
GTATCTTCTC AAGTTTCACA ATGGGGTGGA ATCCCAAGAC TATTTGCGAT CCCTGGAGGG 
GGCTGCTGGG GATTACCACA GGCATGGTCA CCAATCTTCT GTCATTCACT GGCAAACCAC 
TTTGATGGAA ATTTTGAATC AAGAAGGAAT ACGCGCTTCG ATACCCAGAC CCCCACTATC 
GGAATCGTAC ATCGACACTG ATGACCATGA AGACGAATCA AGTCTCCAAA CCGGTGTTGG 
AAAATGGCCG GACAAGAATC TTGTCCAGGT GTGTGTGCAT GAACTACCGG TAGTGTCTAG 
TGAACGTTCG CCGTGCAATC TTGTTGTGCG ACTGTTGACG TGGACTTCGG GTAGGCCGCT 
GAGCGCACTG CGAGCTTTTC CCGTGGAGAC CCTTGCCGAA GCTGGTCGAC TTTTGGGACG 
TATCAATCGC GCCTTTGACA AACTGACACT AGTGGATTCG GCTACGAAGA CCGTCTCGGA 
TGCTTTCCAT CGGTACGATA CTTCCGTGTT GATCCCCGGG AAAAGGTATC ATCAATGGGA 
TGGCAAACAC ACGGCCGACT TGGAATCCTT TGTGCAGCAT ATTCCGGATC AGAAACGTAG 
AAGCCTCGTA GAGTCAGTTC TGGATGCCTT CCAGCGAGAT ATCCTGGATA CTGGCATCGA 
CAAGAAGTTT CGGACGGGGG CCTTACATGG GGATTTTAAT GACGCCAACA TTTTGGTAGA 
CGAAGATCTA AATGCTACGG GTGTAATTGA TTTTGGAGAT TCCATAATAA GGTAAGTTTC 
GCAGCACGAC TCGTCGCTGT TGCTTGCGGC TCATCAAACT AGAGTGCCCG GATCCATTTG 
TGCGCAAGAT CGACCGATTG ACAAAATATG TCGTCGGAGG TTAAGTTCAT GATCGCCGTG 
CTGGATACTT CATTTCGACG AGCAAGATTG AATGAGGGAA TTAAAGCACC CGAATGTCAA 
CGCTATCACA GCTTCTCAGT TGGTGAGAAT GATTGTGACG ACGGCATTCA AACACCATAT 
CTGATACTGT CCTTTCTTTG TATGATTCGT CAAAGCTGGC GAGTATTGGA TATTTCCGTA 
GCTATGGCGT ATGCGACATT GTCTGTGTAC GGTAAATCTA AGCGTATGAT TTCTGCCGCG 
GCTGCTATTC TTCGCGGTTA CAATGCAGTT TATCCTTTGA CCGAATTGGA ACGCAAGCAT 
TTGGTGCTAC TAATGTGCTG CCGGCTCGCT TGCTCCGTAA CACTCGGGGC GTTCTCGTTT 
CAACAGAATC CTGAGAACAA GTACTTGCTG CTTCATTCCG AGCCAGCATG GGAAGCTCTC 
GAATTGCTTT GGTGCTCCGA TCCGGGCCGG CGGTTTGAAA TATCCAATGC GGCAAACAGT 
CTTTTTTCTC AAGCTTGTCT TTACAAGGAT TCTCTACAGG GCGTGGTGGA TTGCTCCGAT 
ATTGATCTTC CTGATCCAAC GGTCCCTGAT TATTTCTCGT CAGTTCGTGC TCTCCCGATG 
CCAACAGGGC ATCGACAAGC CAGCAAGGAT GACGTAAACG ACTGAGATTG ACATCATAGC 
CTTTGTGACA GAAATCGTAA CGAAACTCGA CGCGAGAAAA AAATACTGAC AGTGAAGACA 
TACTGTTTCG CAGTAAAATA GACCCTGTCT CAAGTTAAAG GAGGTCATCT ATCAATTACA 
AGAGAAAGGC CTGCTGTTCG TGAAACAAAT CCGAGCAGCT GTCACAATCG GAGATAGCGC 
TTTTCCTTCA ACGCATTTGA CGGTTTACCA TGACCATACA TAAAGGGGTT TCTAGAGCCA 
TATGGGCATG GCGGTCTGAA CCGAACGATG AAATCTTTTT GTGACAGGAG TGCGAATGCT 
CAGGTCGTTG TTGTGAACCT GTCACCTTTG AAGGGCAAAA GGTAGGTGAT ATTGCTGAAC 
GAGGACATCT AGATTTTTAC TGGGATTCAA TCTTTTTAGG GTTATTTCTA TGGTGAAATG 
GAGAAGAAAA CCGTGGTTTA CATCGGAGCC GAGTATTAGG CAGTTAAGGG CTTTCAAGTT 
TTTTAACTGT AAGATTTGCT GGAGCTTTGG CAGACGTGAA TACCGTGTGG TAGGTTGTAA 
CTTCTAGTAA CGTTTACATT CGTCTACGA 

 

Protein sequence

MSLTSTAEQL SDEELRKWLK PNVTEEDALK VLDASYVPSS GSQHRRILKQ LDSYDDANFW 
VEINNVQYLL KFHNGVESQD YLRSLEGAAG DYHRHGHQSS VIHWQTTLME ILNQEGIRAS 
IPRPPLSESY IDTDDHEDES SLQTGVGKWP DKNLVQVCVH ELPVVSSERS PCNLVVRLLT 
WTSGRPLSAL RAFPVETLAE AGRLLGRINR AFDKLTLVDS ATKTVSDAFH RYDTSVLIPG 
KRYHQWDGKH TADLESFVQH IPDQKRRSLV ESVLDAFQRD ILDTGIDKKF RTGALHGDFN 
DANILVDEDL NATGVIDFGD SIISFSVGEN DCDDGIQTPY LILSFLCMIR QSWRVLDISV 
AMAYATLSVY GKSKRMISAA AAILRGYNAV YPLTELERKH LVLLMCCRLA CSVTLGAFSF 
QQNPENKYLL LHSEPAWEAL ELLWCSDPGR RFEISNAANS LFSQACLYKD SLQGVVDCSD 
IDLPDPTVPD YFSSVRALPM PTGHRQASKD DVND