| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47413 |
|---|
| Symbol | |
|---|
| ID | 7202549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 567127 |
|---|
| End bp | 568651 |
|---|
| Gene Length | 1525 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181754 |
|---|
| Protein GI | 219122857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGCTGATGA TGCTAGTTGG TCAACCTGGT TTTTTCTCTG TTGGCAACGT GCCTGTCTAA
CCCGTTACCA CAACCCACTG GGAACATCTC CAACAGTTTT CGTATAAACA GAAGCACAAA
CGCACACGTT CGAACTTTCA ACCACACCAT GAAGTTTTCC CTCACGCTGG TTGCCGTTTT
CGTGAGTGGT TCCGCCGCCT TCGTCCCGAA CACCTTCTCG GCGACGGCCC GCACGGATGC
GCTTCGTATG ACGACACCGG GTTACGAGAT CGAAAGCGAG TCGAGTGGGG CACGCCGTGC
CTTTGTACAG ACGACCTCGG CTGCCGCCGT TGTCTCCGTC GCTAGTGCGA GTGGTCTGGT
GACGCCTCCT CCGGCCGAAG CCGCGTCGAG TCAACTCTGG TCCAAGGTTC CTTTGCCTTT
CGAGGACACG CTTTTCGATA TTGATTTCGA CAGCCCGACC CACGGATATT TGGTGGGTGC
GCGTGGTGCC TTTGCCGAAA CCAACGACGG TGGAAAAACG TGGGAAGCCC GTTCTTTCTC
CAACCTGGAT CCGGAGGAAG AAGTCACCTA CCGATTTCAG GTACTGTCCT TTAAAGACGG
CGAAGGCTGG GTTCTCGGTA AACCCACACT TCTCTTGCAC ACCAAGGATT CGGGAAAGAC
CTGGGAACGG ATTCCCTTGT CGCCCAAACT TCCCGGTGAA CCTACCGCGA TTGTGGCCCT
CGGACCCAGC CGGGCGGAAA TGACGACTTC CTCCGGAGCC GTCTACGTCA CGGACAACGC
CGGCCGCAAC TGGAAGGCAC AAGTTAAGGA AACGATTGAC GCCACACTCA ATCGAATCAG
CTCCAGTGGA GTCAGTGGAG CTTCCTACTT TACCGGAAGT ATTATTAATC AGGTCCGTGA
CGATTTGGGC GCTTACCTGG CCGTTTCCAG CCGTGGTAAC TTCTTTTTAA CCTGGGAGCC
CGGTCAGGAC TTTTGGATCC CGCACAACAG AGGTACGCCG CGCCGGATTC AAAACATGGG
GTTCGTCGAA GGCGATATCA AAAAAGGTCT CTGGATGACA TTGAACGGAG GCAAACTCTT
CATTAGCTCG GAAGAACCCG ACTTGACCAA GGATGTTTTT GACTTTCAGG AGGCCGACAT
CAAGACTGGT GGATACGGCA TTACTGACGT CGCATGGCGT AATCCGAAGG AAGTCTGGGC
CGTGGGTGGG TCCAACACGA TGTACGTGAG CTTTGACGGC GGCAAGAAGT TCCAGTTCGA
CAAGAGTGGC AATGCCTACC CCGGAAACCT TTACAATGTC AAGTTTTTCC CCCAGTACGG
TAACGCTGGA TGGGCTCTCG GTAGCAACGG CTTGCTACTC CGTTATACGG GTTAAACGAC
TTTTAACCGG TTGTTTCTTC AGTTTGCCGA TCTCTCATTG TCAGGAAGAA AAAACGAGGC
TTGGAACGAA GGAACGATCT CATTCGCAAA CCTCTCCCCC AGCTAGTATT AGTACTCAAG
TATTATCTTT AATAAAAGAT TGTTT
|
|---|
| Protein sequence | MKFSLTLVAV FVSGSAAFVP NTFSATARTD ALRMTTPGYE IESESSGARR AFVQTTSAAA
VVSVASASGL VTPPPAEAAS SQLWSKVPLP FEDTLFDIDF DSPTHGYLVG ARGAFAETND
GGKTWEARSF SNLDPEEEVT YRFQVLSFKD GEGWVLGKPT LLLHTKDSGK TWERIPLSPK
LPGEPTAIVA LGPSRAEMTT SSGAVYVTDN AGRNWKAQVK ETIDATLNRI SSSGVSGASY
FTGSIINQVR DDLGAYLAVS SRGNFFLTWE PGQDFWIPHN RGTPRRIQNM GFVEGDIKKG
LWMTLNGGKL FISSEEPDLT KDVFDFQEAD IKTGGYGITD VAWRNPKEVW AVGGSNTMYV
SFDGGKKFQF DKSGNAYPGN LYNVKFFPQY GNAGWALGSN GLLLRYTG
|
|---|
| |