| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47382 |
|---|
| Symbol | |
|---|
| ID | 7202431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 478066 |
|---|
| End bp | 479743 |
|---|
| Gene Length | 1678 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181733 |
|---|
| Protein GI | 219122814 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTCGGTTT ACAGTTGTTG ACAACATGTG GCAAACTTAC AATCGATTGG ACAGAATTTG
GGACGATGCA GGGTCATCGG ACTCTGACAG TCAAGAGAAT TCGTCCTTCC TCTCTTCAAA
TGCCTCTTTC AGCGACTACG AGCGCTCCGG TACTTCAGCT CCAGTAGCTG CGGCTGCAAC
AGCTTACGAT AGTGGAATTA CTGTTAATCA TGTTTCATCG CTTTTGAGGC ATCGTGGAAA
AGAATTTTCC GTCAGCGAAA TGCGAGGAAA TGACGCCGAT GTGATATCAT ACGATAGCGA
AGGAAGCGGA AGAACACCAC CGTCACAACA TCGTCGCTTT CGTTGGGGGA GACGATGGCG
ACGTCCACGA CAAACCCGTC AATGGCTGCG CAGTGTATGC CAAAATTATT GTAGCGATAC
CAACGACGTG GGTCTTTTTT GCAGCGGTGT TGCCACCGTT TTGCTTTGCT GTAGCCTTCT
GGTTTGGATT GCGCTTGCTT GCATTGTTCC AGCGTGGGGC AACTCGCTGG GCACGGGCAG
CAAGGGCGCT GGCTTGACGA CTCGGCAGCG GACCCACATG CGAACCAAAG ATCGAGCGCA
TTCAGGATTT GGAAGCAAAG AGATGCTGCA GAAGGTCGCC ACACACGTTT GGAACTCTGT
CCATGGCAAG CCCAACGCAA ACGACGTTGT GATTGCGAAA AAAAAGAAGA CCTCAGAAGC
TCTTAAGCCC GGATGCGTAA GAGCCGATTG GCAAGAGTTG AACTTGCCAA ATTGCAATCT
TATCCACGAA GTTGACTTGC AATCTGTTTT CGACCGTCAA AGGCAAGGGC GCGACAAGCC
TATTGGTATC CTCGACAACG GAATGTGGAG AGATGTCATA GCCGTTGATC CGAGCGCTGT
AATGAAAGAA CCTCTGGTAT TAAAGGTGAT GAAACGAGTC CACGATTTTG ATCAACGAAA
CTTTGACCGC CATCGACGTG ATGCGCTGTC AATGGAGCAG CTTACTTCGT CGCCGAACAT
TGTTGACATC TATTCATTTT GCGGAAACAG CATGTTGACG GAGTTTATCG GAAATAATAT
GGAGCATATC TTTTTAGAGA ACACTCTCGT GAGTTCCAAC AAATTTGCAA CACGACACAC
TGAGCGAGGA CGGCTGTATC TGGCGCTGCA AGCCGCCCGA GCCGTGCGGG CGCTCCACGA
ATTACCAGGG GGGCCAATTG TTCACGCCGA TCTGCAACCA CGTCAGTACT TAGTCAAAGA
TGACGGAACG GTCAAACTCA ACGACTTTAA CCGGTGTCGG TTCATGGGGC ATCGGTACGA
TACCGGAGCA TGTTGTCCAC TTCACATTCC ATCAGCCCCG GGTAAATGGC GCTCACCGGA
AGAGTACGCG TCTCAGGATC TGGACGAAAA ACTCGATGTT TACTCGTTAG CCAATGTCTA
CTATGGAATC CTGACGGGCG AGCAGCCGTG GGATAAATGG AGTGTGGCGG AAACAAAGCA
GTTTGTAATG AAAGGCACGA AACCTTTCAT TCCTTACCTC AATTCCAAAA ACGCGTCTCA
CACGGATATG GTCCTGGCCA CCTTAACAAA TCGTGCTTAC GAATTAGATC CGAGCAAGCG
TGTCAGTGCT GCTGAAATCG TCGCTACTCT AGAAGATTTA TTGAACGGAG AATTTTAA
|
|---|
| Protein sequence | MWQTYNRLDR IWDDAGSSDS DSQENSSFLS SNASFSDYER SGTSAPVAAA ATAYDSGITV
NHVSSLLRHR GKEFSVSEMR GNDADVISYD SEGSGRTPPS QHRRFRWGRR WRRPRQTRQW
LRSVCQNYCS DTNDVGLFCS GVATVLLCCS LLVWIALACI VPAWGNSLGT GSKGAGLTTR
QRTHMRTKDR AHSGFGSKEM LQKVATHVWN SVHGKPNAND VVIAKKKKTS EALKPGCVRA
DWQELNLPNC NLIHEVDLQS VFDRQRQGRD KPIGILDNGM WRDVIAVDPS AVMKEPLVLK
VMKRVHDFDQ RNFDRHRRDA LSMEQLTSSP NIVDIYSFCG NSMLTEFIGN NMEHIFLENT
LVSSNKFATR HTERGRLYLA LQAARAVRAL HELPGGPIVH ADLQPRQYLV KDDGTVKLND
FNRCRFMGHR YDTGACCPLH IPSAPGKWRS PEEYASQDLD EKLDVYSLAN VYYGILTGEQ
PWDKWSVAET KQFVMKGTKP FIPYLNSKNA SHTDMVLATL TNRAYELDPS KRVSAAEIVA
TLEDLLNGEF
|
|---|
| |