Gene PHATRDRAFT_47364 details

Gene Information

• Locus tag: PHATRDRAFT_47364
• ID: 7202415
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 399218
• End bp: 399949
• Gene Length: 732 bp
• Protein Length: 226 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181550
• Protein GI: 219122434

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.697411
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAATCCTGCG TACTCTGAGA ACCTCAGTAT GGGAAGACTA TGCTTATCCG CCGCAGCGCT 
GGTACCATTC CTTTCATTGA ACGTCGTGGC CTTAGTTCCC ATGCATCGGC AAAAGTTTCA 
GTCTAGAGTC ACAACGAGAA AGACTGTTTC GTCCAGCGCT GGGGCATTGT TTCTTAGCAC 
CGAGACAGAA ACTACCAAAA CGGTGACACC GGGAAACGAA GGGGATGTGA GGGAAGCAAG 
CGGCAGTTTA ACGGATCAAT TGGCCATTGC GGAGAATAAT CCATCATTCT CGTATGGCAC 
TTTCGCCAAG CAGAATCCCT TCGCCAACAA TCTTCTTATT GCGACTACCA AGACGGCGGC 
TGCTGACTTG TTGGCGCAAA CTGTCATTTC TCAGACACCC CTGGCCGAGC TGGACCTACA 
ACGCAGTTTG CTCTTTTGCT TGTTCGGAGC CGTCTATCTC GGGGGATTTC AGTATCTGTA 
TCAGGTACAG ATATTCAAAA AGCTGTTCGA CATCGACAAA TTTACCTCGC AACCGTGGGC 
GGACAAGCTG AAAGATGGTC CGGGACTTCA GTCACTAGCT GCCCAAACCG CTTTGGATCT 
AACCATTTTG ACCTTGATTT ACCTGCCCAC CTTTTACGTG TTCAAGGCTA GCGTTTTTCG 
TGGTTCGCCC GACCCTGCCG TATGGATAGG TTCAGGTCTG GAATCGTACA TCACTAACTT 
TGCGAAAGAT GA 

 

Protein sequence

MGRLCLSAAA LVPFLSLNVV ALVPMHRQKF QSRVTTRKTV SSSAGALFLS TETETTKTVT 
PGNEGDVREA SGSLTDQLAI AENNPSFSYG TFAKQNPFAN NLLIATTKTA AADLLAQTVI 
SQTPLAELDL QRSLLFCLFG AVYLGGFQYL YQVQIFKKLF DIDKFTSQPW ADKLKDGPGL 
QSLAAQTALD LTILTLIYLP TFYVFKASVF RGSPDPAVWI GSGLES