| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47352 |
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| Symbol | |
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| ID | 7202407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 371748 |
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| End bp | 373302 |
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| Gene Length | 1555 bp |
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| Protein Length | 501 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181542 |
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| Protein GI | 219122418 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.402836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGATTGTAA CATATACAGA CAGACTGTTG GAGCATAAGT TCTTACAACA TGGTTGCTTT
CATGATCACC AAGAGAAGTG CATCAGCACT CTCCTTTGTA ATTGTAGTGT CATCGACTAT
GGCAGCTAGT GCCTTCCAAA GGTCCACTCA ACAACACCAT CCTCTTGCTG CTAGAAATTA
TCCCGCATCA TCGAAACACA GGGTATCGTC TCTACTCCAG TCACGGCAAT TCAAGCGGCC
GACGCATCTA CAATCTTCTT CTTACAAAGA GTCGACAAGA AGGACGGACA GTGGTGTGCT
CTCCGTATTC AGTGATACAC CGATTGCTCC GTATTTGGAT GCCCCAAGGT TCGGATTGTC
CGAAAAGAAT ATGGGTTTTC TAGCACTCTT CAGCGTCCCC GTTGTATGGG GTACATACGT
ACCGGTGGTT CGAGTATTGT ACGAAAGCGA TCCACCCGTA CCTGGCGTGC TGTTCTCCGC
AGCTTACTTT GCAGTCGCTT CACTTTCAAC TCTAGCTCTA CTCATTGTCT TTCCCAATCT
TGATCGGGAT GATAGCTCAC ACGGCCAGGC AGCGCGTAGA GATGCTCTAG CTCTGGAGCA
AGAACAGTCC CTGGACGACA GTGCTTTATC AACGTACCCC CAGAAAGATT TTTGGTCCAA
GCTGAACACC CTGCATCTTC CCATTGGTGG CATCGAGATC GGCACCTATC TCTTTCTCGG
GGCAACCATG CAAGTTATGG GACTCAAGAC GATACCAGCT GACCGAGCAG GATTTTTGGT
ACAGCTTTCT ACCATCTTTG TCCCTTTGGT TGAAGGCGTT ATGAAAGGTA ATCCCTCCGC
CATATCAATG CGCACGTGGG GAGCATGTGG ATTGGCGCTT GCAGGGATTG GAATCATGAG
CCTAGACCTG GACCACCAAG CAACTTCCGA GTCATTGGAG GGCGCCATTC AAGCGTCAAC
ACAAATGGCG AGCTTTTCGA ATGGAGATTT CCTGACAGTA GGCGCGGCAT TGATGTACAC
AATGAGCATC ATTCGTCTCA GTAAATTTTC TCAAGAATCA TCCCCTCTTC GTATCACTGC
CTCGAAGGCG ACGGTTGAGA TGATACTGGC CGCTTCCCTA GTTGCCGCAG CGGTATGGTC
AGTGACAACA ACTGGTGCGG TCGACGCGAC CAGTACGAAC GCTATTATGT CGTTTGTACA
TGATTCTGGA AACGACATCG TACAATTTTC GGAAGCAGTC CGAGAACGCT GGGCCGACGG
CACCTTGCCA CTGGAATCTA TTTTCAAGGT GGGAGCGGCC ACACTCTATA CAGGTTGGGT
CGCTACGGCA TTTCTGGTCT TTGCACAAAG CTACGGGCAG CAACGCGTCA AGGCTACAGA
CGCAAACCTC ATCTATTCGC TGCAACCTCT GTTTACATCT TTCTTTGCTT TTCTAATGCT
GGGAGAAGTC ATGGCACCGA TCGGCTATGT CGGAGGCTCG TTTATTGGCG GTGCCGTCTT
TATGGTCGCT TCTAAGCCGA GTGAGGAAGA CGAGCCCTGT GTAAAGGAAG TTTAG
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| Protein sequence | MVAFMITKRS ASALSFVIVV SSTMAASAFQ RSTQQHHPLA ARNYPASSKH RVSSLLQSRQ
FKRPTHLQSS SYKESTRRTD SGVLSVFSDT PIAPYLDAPR FGLSEKNMGF LALFSVPVVW
GTYVPVVRVL YESDPPVPGV LFSAAYFAVA SLSTLALLIV FPNLDRDDSS HGQAARRDAL
ALEQEQSLDD SALSTYPQKD FWSKLNTLHL PIGGIEIGTY LFLGATMQVM GLKTIPADRA
GFLVQLSTIF VPLVEGVMKG NPSAISMRTW GACGLALAGI GIMSLDLDHQ ATSESLEGAI
QASTQMASFS NGDFLTVGAA LMYTMSIIRL SKFSQESSPL RITASKATVE MILAASLVAA
AVWSVTTTGA VDATSTNAIM SFVHDSGNDI VQFSEAVRER WADGTLPLES IFKVGAATLY
TGWVATAFLV FAQSYGQQRV KATDANLIYS LQPLFTSFFA FLMLGEVMAP IGYVGGSFIG
GAVFMVASKP SEEDEPCVKE V
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