Gene PHATRDRAFT_47331 details

Gene Information

• Locus tag: PHATRDRAFT_47331
• ID: 7202393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: -
• Start bp: 311802
• End bp: 316510
• Gene Length: 4709 bp
• Protein Length: 879 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002181699
• Protein GI: 219122742

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.217105
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGATTGAGTG ATAAGAATAA ATTCACTATT TGATTGCCAA TCATATAATC AGGCTACGGG 
AAAATTTTAA TGAAGCAAGA CGCTATGAGC CTGCCGCGCT TCGCTCCCCC TTTTCGGAGA 
TGTGTGACCT TGTCTCATTG GTGGGAGTCT TCCGGCCACG ACAGAATGTT ACACACCACC 
AGTACAGGAG CGAGGAAACT TTTTTTTGGC GTCTTTTACT TGATTCTCTT GCTCAGCTAC 
TCATTTTCTG CGCGTGCGTT TGCTTCGACG CCGAATGGGC GGCGTCGTTT GAAAATATCA 
GCAAAAAACG CTATTTCAAG CGAGGGCACG AACGAAATTC AGACTGTTTC AGCTTGTTTA 
CCGAGAAGTC CATTAACAAA TCGAAGTCGA GATGATTTGT CGTACGAATT TTGGGGTGAA 
AAGTTATCGT TGGCGCACTT TAATATGGAT TTACAAAATC TGGCGTTGGA CGACCCGGCC 
AAGGCGCAGG ATGCCTTAGA GATCATGCAG GAGCTTCACT GGAAAGACCC CGAGAATCCG 
TTTACGGTTG AACCAGATGC AACGTGCTAC GCCACAGTAA TAGAAGCTCA TATTGGAGTA 
GGGAACGTCG AATCTGCATG TTCGATACTC GACTACATGG AACGAATATC GGACGAGGCT 
ATCGAAGGTG GCCGCTGTTC ACCACTGGTG CCGACGGAAC GAATTTACAT GCTGGTTGCA 
CAAGGCTGGG CAAATTGTGC CCGAGACGAC ATAACCGGTC ATCCAGCATT TGAAGCTGAG 
GCATTAATGA GACGAATGCA AAAACGCAAG ATGGAACCGA GCGTCAAGGT CTGGAGCATC 
GTGGTGGAGG CTTGGTGCAG ACGAACTGGT ACCGTTCGTG CAGCGATGCA GCGAGCCGAG 
TCCTTACTCG AAGAAATGGA AGCTTCAGTT GATAAAAAGG TAGGAGAAAG GGAAGCAAAA 
AGGAGCGCAG TGCGTCCTAA TGTATTAACA TACACTAGTT TTATCGGAGG ATTGGCGAGG 
AGCAAAGATC GCGATTTGGC GACACGAGCA GAAGCTACTC TCGAGCGAAT GGAGCGATTT 
GGAGTACAGG TCGATATGGT AGCATATACA TCTGTACTCA ATTGCTGGTC AAAATCTGTC 
AGTAAGCGTG AAAGATTGCA GTCGGCGTCA CGTGCATTGC AAATTTTGGA CAAAATGGAA 
GGGATGTACG CCAGGGGAGT GTACCACGTC AAACCAAGCC TTATTACTTA CGCAACAGCG 
ATTCGTGCTG TCGCAAACAG TCTTGATCCA AGAGCTCCCA AATTGGCCGA AGCTATTTTA 
CGAAGAATGT ACAAACTTTA CGAGTCTGGA GCTATCGAGA ACCTGAAACC GGTCACAACC 
ACATACAACG CGGTTCTTAA CGCCTTGAGC CGTGCGAACG GAGTCTCTCG TGTTAAATTC 
GCAAGAAGAA CAGAAGTTTT GATGAAGGAA ATGTTCAAGC GAGCAGAAGA AGGCGAACGT 
GATGTTATGC CTGATGTACG AACGTGGGCA GCTGTGCTGA GGGCATGGTC GACTTGCGGC 
CAACACGACG CTGCTGAAAA CGCCGAAAGG GTTCTACAAA GGCTCGAGAC CCTACACCGG 
AACGGAAGTA CGACGGTTCG GCCAAATTAC GTCTGCTATA CAACTGTAAT GGGAGCATGG 
GGACATTCAA GAAGACAGGA TTCTCTTGAC AAGATGGAGT CTCTTTTGAA GCTGATGGAG 
GAAGGCTATG AGAAAACACA AGAAGCTGAT ATCCGCCCAA ATACTGTTTC CTATGTAACA 
GCAATTGATG CATTCGTAAG AAGAAATGAC AACAATGCAG CCACCCGCGC GCAGGAAACA 
GTCGACCGTA TGATGCGTCT GTATGCCTTA GGTCTCGGCC ATGTTCGACC GACGCGAATA 
ATTTTCAATA CTCTGATACA TGCCTGGTCA AAGTCGAAAG ATCGAGAAGC GGCCAAGAAG 
GCCGAACAAA TTTTCCAATG GATGGAAGCT CAGTACGATG CAGGAGACTA TCTCGTGCGA 
CCTGATGAAG TGAGCCTTTG TGCGGTTTTA AATGCATGGG CAAATAATGC AGAGAACGGA 
GGCGCAGACC GGGCTATTCA GATTTTCAAT CATATGGAGG CTGTTTCTTT AGAAAAAAGA 
GGATTTCACG TATCGATCAT GATGCCTAAT ATTGTGATCA AAGCTATAGC ACGAAGTAAA 
GACAAGGACA GTTTCCGTAA GGCGGAAGCA ATTCTTTTGA AACTTGAGGG CGACTACGAG 
AGAGGATTGA CAATCGTTCA ACCTGATGTG ACAACTTACT CTTCTGTAAT TAACTGCTGC 
GCGTATTATC GATACGCTGA AGGAAGAGCA GATGCGTTTG AAACTGCAAT GAGAACATTT 
AGAAAGGTTT CTGTCCTCCA CAATGCAAGT CCAAATAACA TCACTTTTGG AACTTTGTTC 
AAGGCAATCA CAAATCTACT GCCCGAGAGC GAAAAGCGAG AACAACTTGT GGAAGAGTTG 
TTTGATCAAT GCTGCACAAA TGGTGTAATG GATGGTTTCG TACTTTCTCA ACTTCGGAAC 
GCAAGCCCAA GACTTTACCG AACGCTTGTA TGCAAAACAT GTGATCAGGG AAACTCACGA 
AGTGGGGATA ACATTGACAG TATATTGAGA CGGCTACAGC CGGAATGGAG TCAGAATATT 
GTCGACTAGA CAATGATTAG AATTACAAAC ATGGATTGTA TACCGACTGG GCCTCTACCT 
TGTGTTGTAC TTAAAATTTC GCAGAAGTCA AACTCTTCTT GGAGTACATT TACTGAAGTT 
TCAGAAGAAA TGTCCGAGAC CAGTTGCTGA GGCTCTTGTC AACGTAGCTT CCATCGACGA 
CTGGAAGGTT TCTGCCCCTG GTAGTCTACC GATGTCGCTC TAATTTGCTA GCAGGGTGCT 
CACTTGTTAC AATTTCCATG CTCTTGTAGA GTTGAAGGTC TTCAGAGAGT GAATCTGGAG 
GCGTGCTCGC TTCGTTTTGT TCCAAAGGCG AATTGAAAGA GAGAACAGAA AGTATTCAGT 
TCCGGTTGAG CTAGCTCGAG GACCGGAGAC GAGGATTTAG ATATCTCCGG GATATTTTAC 
TCCTGCAGCT GTCTGATGAG AGGGTGTGGC AAGCAATTCA AATTGCGCTG TTTCGATATT 
GGCGTCAACG CCTTTGCCGT ATCGATCTTT TGAGCCATCT GCCAAAAAGC GAATGCCTGT 
AAGTATTTTC TGCTCTACTA TAAAATCAAA ATCTTTGATT TGAGTACCAG CGTCTCACCT 
TCAGCTTCAA GCCTGCTCCG AATTTCAATA TTGCATTTCG CACTGGCCAC TGGATTGATC 
GATACATCAG TCCAATGAGC GACGAAGTTC AGGTGCTCGC CTTTTTCGGT TTCAGCTTTC 
TTTGATGAAT CTGGCTGTGA TCCGACACTA GACGTATCGC CCTCCTCGGA GTCAACTTCT 
TCATCTATTC GATCCAATCT TAGACTGCTC TTTATAGTGT GAGAGTCAGA TGTCAGATCC 
GATGCGCTCC AGGTAATTGA TTGTCCATTC AACTGGTGCG GATCTGTTGC CATCCAGCCA 
TATGCGAGTT GAGCGTTGTC TTGAAGCTCA CTAAAATAAT GTCGCCTCTT TGCTTGGTGA 
TGTGCAATTC GATTTTTTAG GGATACGGCG CAAGCGTCGT TCATATTGGC AACCTTCCAT 
CGCCAAATCC CATAGAAAGA CACTCCTGTT ATGCAAAAGG CCATCATCAC CACAGCTACC 
GCTACCACAA TAACGGAACT TGAATTCATC GCGCTACTAT TGTCTGTGTT GTTATCCAGG 
AGAACGAGAT TTTCGCCAGT TGAATACTCA AAGGAGGTCT GGGCCACGTT TGGGCCAATA 
AGTTCGCGCA GAACATTCTC ATTTCGCAGA AGACTTTCGA TTGTAGAGTA AGCTTTGACC 
TCCACTTCGG GTGCTCCCGA CTCCAGCAAA ATGGAAGTAA TACCACGCAC AGTACGACAT 
TCATTGTACG CTGACATTGA GTTGCATTCG CCTACAAAAA AACATCAAGG AAATTGAAGT 
CAGGAGGCTG CCTGAATGAT GGCAAAAACA GTTTGCAAAA GCTATTCATA CCACCAGTCA 
AAAACCAATG ATTCCTAGAA AGTTGCACGG CAAACAACGG TTGTTGGAGG TCGTCACAAT 
CATCGAGAGC ATGGGCGACG GCTGTTGCGA GCAATTGCTC CACATCATCA AGATTCACAG 
CTGTATTACG TAAAAATTCA ATCGAGTACA GGTAGAACAG GTCAAGTCTT GCTTTGAAAT 
TTCCTACTCG AACCCTATCA CAGGTGCTTG AGATGATACT CTTATTCTCT GGTTCCCGAC 
TCAGCGAAAG AAAAGTCAGA TCAGCGGAGC TCAGCCCCTT TGACCATTTC CAGCAAAGAA 
GGGAGACCAG TAAAGTCAGC GTCCATGACA TTGTTCAATA GGCCTAGGTT GCAGGTCGAG 
TGATACCTGC CATTGAAGAC AGGTCCGTGT TAGTGCTGCT CCTTTGGGTT TTTTTTTTTT 
TCTGAGCCAA TTTTACAAAG TTCGATTGCT TGAGGTGCAG CGGGACGGAT TGGCTGCTTT 
GGTTTTCATG TGAAGCACAT GGTTGCGAGT AAATACAAAG ATCAACTTAA ATTGCAACGA 
GCATTTGTCT AGAATATTTA AATTCGATC 

 

Protein sequence

MKQDAMSLPR FAPPFRRCVT LSHWWESSGH DRMLHTTSTG ARKLFFGVFY LILLLSYSFS 
ARAFASTPNG RRRLKISAKN AISSEGTNEI QTVSACLPRS PLTNRSRDDL SYEFWGEKLS 
LAHFNMDLQN LALDDPAKAQ DALEIMQELH WKDPENPFTV EPDATCYATV IEAHIGVGNV 
ESACSILDYM ERISDEAIEG GRCSPLVPTE RIYMLVAQGW ANCARDDITG HPAFEAEALM 
RRMQKRKMEP SVKVWSIVVE AWCRRTGTVR AAMQRAESLL EEMEASVDKK VGEREAKRSA 
VRPNVLTYTS FIGGLARSKD RDLATRAEAT LERMERFGVQ VDMVAYTSVL NCWSKSVSKR 
ERLQSASRAL QILDKMEGMY ARGVYHVKPS LITYATAIRA VANSLDPRAP KLAEAILRRM 
YKLYESGAIE NLKPVTTTYN AVLNALSRAN GVSRVKFARR TEVLMKEMFK RAEEGERDVM 
PDVRTWAAVL RAWSTCGQHD AAENAERVLQ RLETLHRNGS TTVRPNYVCY TTVMGAWGHS 
RRQDSLDKME SLLKLMEEGY EKTQEADIRP NTVSYVTAID AFVRRNDNNA ATRAQETVDR 
MMRLYALGLG HVRPTRIIFN TLIHAWSKSK DREAAKKAEQ IFQWMEAQYD AGDYLVRPDE 
VSLCAVLNAW ANNAENGGAD RAIQIFNHME AVSLEKRGFH VSIMMPNIVI KAIARSKDKD 
SFRKAEAILL KLEGDYERGL TIVQPDVTTY SSVINCCAYY RYAEGRADAF ETAMRTFRKV 
SVLHNASPNN ITFGTLFKAI TNLLPESEKR EQLVEELFDQ CCTNGVMDGF VLSQLRNASP 
RLYRTLVCKT CDQGNSRSGD NIDSILRRLQ PEWSQNIVD