Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47329 |
Symbol | |
ID | 7202494 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | + |
Start bp | 310826 |
End bp | 311793 |
Gene Length | 968 bp |
Protein Length | 261 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181526 |
Protein GI | 219122385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.910141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACGA GCATTACAAA GGCCGCCGTT TTCCGAGCGA TTGCACAAAC ACGCCGATCA TGCAAACGCT TTCAACCGGA GAGAAAAATT CCGCCAGAAA GCTTGAAGGA CATTTTGCAC TCCACTATTG TAAGCACAAC CAGCTCGAAC GGAACCAGAG AAAGAAAGCT TCCGAAGCTG TCGTCGCTGC CAGATATGAA GTGAAACTAG CGAGTTTATT TGCTGATGCA AAAGTGTGAC TTGAATCATT ACGACATACA ATTTTTGTGT GGTTACGGAA CTCATTTTGT TTATGCTTGT CTACCTTGCA GAGAGCGCCT TCGAGTTTCA ACCTTCAACC AACTCAAATT ATTGTTGTAC AGAACGAGGA CAGGAAAAAT AAGCTTGCAG AAACAGCTAT GATAGGACCA GGAAATCAGT TTCGAACTCG ACAATGCTCA GCATTAGCTG TATTCTTGGC TGATTTGGAA GCAAGCAAAC GCATTTCACG AATCCAGGAG CTTGAAAAGG ACTGGGGCCA AAGAGATCCT ACATATTCGG CGACGATGCC TTTGACGACT TCATTCCTGA TTGGCGAGGG CCACGCCGCA ACATTGTTGA AATCACTGGC AATACGCACT ATGTCTGAGC TTCAGCCCAT GCCAACTGCT GAGCCGGTAG AAACCTGGGC GTATAAAAAT ACCTCGCTGG CGGTGCAATC TTTCACGCTA GCGGCCGCGA GCCACGATCT AGCGACTTCG ATCATGGAGG GGTTTGATGC CCGAAGAGCC AAAGAAGTTT TACATATTCC TGATCGATAT GGAATTCCCA TGATGGTGGC AGTAGGATAC GAATACGAGG ATCCTACCAC GTCTCAGAGC TTGACGCCTC GTTTGGATAT GCAAGAGGTC GTTTTTGGGG ATTCTTTTGG TTCGCCTTTG GACCTCACAT CTGCCAATCA TCCCATTTCT AACGCAACGA GCGCTTAG
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Protein sequence | MATSITKAAV FRAIAQTRRS CKRFQPERKI PPESLKDILH STIRAPSSFN LQPTQIIVVQ NEDRKNKLAE TAMIGPGNQF RTRQCSALAV FLADLEASKR ISRIQELEKD WGQRDPTYSA TMPLTTSFLI GEGHAATLLK SLAIRTMSEL QPMPTAEPVE TWAYKNTSLA VQSFTLAAAS HDLATSIMEG FDARRAKEVL HIPDRYGIPM MVAVGYEYED PTTSQSLTPR LDMQEVVFGD SFGSPLDLTS ANHPISNATS A
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