Gene PHATRDRAFT_47329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47329 
Symbol 
ID7202494 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp310826 
End bp311793 
Gene Length968 bp 
Protein Length261 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181526 
Protein GI219122385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.910141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGA GCATTACAAA GGCCGCCGTT TTCCGAGCGA TTGCACAAAC ACGCCGATCA 
TGCAAACGCT TTCAACCGGA GAGAAAAATT CCGCCAGAAA GCTTGAAGGA CATTTTGCAC
TCCACTATTG TAAGCACAAC CAGCTCGAAC GGAACCAGAG AAAGAAAGCT TCCGAAGCTG
TCGTCGCTGC CAGATATGAA GTGAAACTAG CGAGTTTATT TGCTGATGCA AAAGTGTGAC
TTGAATCATT ACGACATACA ATTTTTGTGT GGTTACGGAA CTCATTTTGT TTATGCTTGT
CTACCTTGCA GAGAGCGCCT TCGAGTTTCA ACCTTCAACC AACTCAAATT ATTGTTGTAC
AGAACGAGGA CAGGAAAAAT AAGCTTGCAG AAACAGCTAT GATAGGACCA GGAAATCAGT
TTCGAACTCG ACAATGCTCA GCATTAGCTG TATTCTTGGC TGATTTGGAA GCAAGCAAAC
GCATTTCACG AATCCAGGAG CTTGAAAAGG ACTGGGGCCA AAGAGATCCT ACATATTCGG
CGACGATGCC TTTGACGACT TCATTCCTGA TTGGCGAGGG CCACGCCGCA ACATTGTTGA
AATCACTGGC AATACGCACT ATGTCTGAGC TTCAGCCCAT GCCAACTGCT GAGCCGGTAG
AAACCTGGGC GTATAAAAAT ACCTCGCTGG CGGTGCAATC TTTCACGCTA GCGGCCGCGA
GCCACGATCT AGCGACTTCG ATCATGGAGG GGTTTGATGC CCGAAGAGCC AAAGAAGTTT
TACATATTCC TGATCGATAT GGAATTCCCA TGATGGTGGC AGTAGGATAC GAATACGAGG
ATCCTACCAC GTCTCAGAGC TTGACGCCTC GTTTGGATAT GCAAGAGGTC GTTTTTGGGG
ATTCTTTTGG TTCGCCTTTG GACCTCACAT CTGCCAATCA TCCCATTTCT AACGCAACGA
GCGCTTAG
 
Protein sequence
MATSITKAAV FRAIAQTRRS CKRFQPERKI PPESLKDILH STIRAPSSFN LQPTQIIVVQ 
NEDRKNKLAE TAMIGPGNQF RTRQCSALAV FLADLEASKR ISRIQELEKD WGQRDPTYSA
TMPLTTSFLI GEGHAATLLK SLAIRTMSEL QPMPTAEPVE TWAYKNTSLA VQSFTLAAAS
HDLATSIMEG FDARRAKEVL HIPDRYGIPM MVAVGYEYED PTTSQSLTPR LDMQEVVFGD
SFGSPLDLTS ANHPISNATS A