Gene PHATRDRAFT_47306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47306 
Symbol 
ID7202481 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp241627 
End bp242537 
Gene Length911 bp 
Protein Length193 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181515 
Protein GI219122362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.719708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAGCACGAG TCGGCAAACA CGCGGCTCGA ACCAAAGGAA ACGGACTTCC AAACTCGAAA 
ATGACCATGG GGATGCGATC TTTTTTTAGT TTTTTGGCGT TTGCCACGAC CGCTGCGGCA
ATCCAGGAGC TCGATGAAGC CTCTTTCGAC CAGCTCATGG GATCCGGAAA GAATGGCATG
ATTAAATTCT TTCAGCCGGT ACGTCTCTGA TCCTCCGCTG GTCTTCAACG CTACTAGTCT
TTTTGGTTTA CATTAGTATC GTACTAGCCA TTGCAAACGA TTTCCATTTT GATCTCTCTA
ACTCTTTCCG GCCTTTCACA ATTGGCAGTG GTGCGGACAG TAAGTAGAAA CGATGGATCT
GGATGACTAC ATTGGACTTG CGGTTGATAA CGAGTCTTTT TCGCTTTGTT TTTCAGCTGC
ACGCGTATGA AGCCCGACTG GGACAAACTA GCGGAGGAAG CCCACAGTTC CGTCTTTATC
GCTGACGTTA ATTGCTCCGA CCAAGCCGAG TTGTGTGAGA AAAACGATGT GGCTGGTTAC
CCAACCATTA AGGTTTACAA GGATGGCGTG GACGAAAAGT ACAATGGCGC TCGTGGGTTC
GACGATCTCA TGGACTATGT CGACGCCAAT CTCGCCTCGA AATGCGACGT ATCTAAGTTA
GAGGAAACCT GCGGGGAAAA GGCAGTCAAG TACGCCAACA AGTGGAAGGA TCGTGAAGCA
GCCGATGTCA CGAAGGAATT TTCCCGGCTG GAAGGCATGG CTGGAAAGAG TATGACAATG
GAGCTCAAAG CCTGGTTGAG AGAACGGATG GCAATTTTAA AGCAACTTAC GGCCTCCGCC
TCGAGTTAAA ATAAAGACGG TTTCCATGCA AATAGTCTGA TGAGAAAGCA GTAGATATTC
CGTTTCCAGT T
 
Protein sequence
MTMGMRSFFS FLAFATTAAA IQELDEASFD QLMGSGKNGM IKFFQPWCGH CTRMKPDWDK 
LAEEAHSSVF IADVNCSDQA ELCEKNDVAG YPTIKVYKDG VDEKYNGARG FDDLMDYVDA
NLASKCDVSK LEETCGEKAV KYANKWKDRE AADVTKEFSR LEGMAGKSMT MELKAWLRER
MAILKQLTAS ASS