| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47276 |
|---|
| Symbol | |
|---|
| ID | 7202362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 161567 |
|---|
| End bp | 162891 |
|---|
| Gene Length | 1325 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181670 |
|---|
| Protein GI | 219122683 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTATTTGACA TCATCAGAAT GGTTCATTGA TTATAAGAAA AAGTTCATTT CCTTCCTTCT
GTGAAGAAGG TAAGGACCTC AATATGATAA AGGAAGGGAA TGTAACGTCC ACCAAGCTCA
AGGGTCACCA AGGGCCAGTA TTGTGCTTGG CGCACAGTGG CACAAATACA AGCGGCGTCT
CCACGGCGTC GCAATCGTCC GCTGCTGCTT CATTGCTTTC CGGATCGGAA GACAGTACAT
CTCGGGTGTG GGATTTACGG AGTAATTGCG TTCGCGCTTC GCTCTGCATC AAGGCTCCTG
GCGCAGTCCT GTCCGTTTCC TTTGGCCCGC GATGGACCGA CCCCTCGGAC AGCATTGCGC
GTGATGGTCC ATCGCAAGTT CGTCGAGACT ACTCTGTTTT CTTGTCGGTA GGAAATTCCG
TTCTCGGATA TGACTTGAGG TACGCCTCGT CCCCTGTCAT AGTGGAACCC TCTGTTGATC
TTTCCAACGT TCTGGAATCG GCAGACGAAA TCAATCAGAT TGCCTTTTCG CCACCCCGCC
GTCAGCGTTC GCTACACCTA GCAGCAGCGG ACGATGCGGG TTGTGTTCGT GTAACGGACG
CCTTTGCACT ATCTAGCACT AGCTCAAAAA ACCATCGAAT TTTGCATCAT GGAATATCGG
AGACGAACAT GGCAATGGTT ACTAGTGTTA ACTTTCGACC ACACTGCAAA CATCTCGAAT
TGGCGTCGGG TGGAACGGAC TGCACAGTCA AGCTATGGGA TGTCATGAAA CCCAAGCACC
CAATATCGTC TCATCTAATC GCCAACTCTG ATGCAGGTGC CAATCAAGTA TGCAATCCAC
CCATGGTACA TACGATGGCA TGGAGCCCAA GTGGCCGTTT GTTGGTCGCT GGTTTGGGTG
ACGGAAGCTG TTGTATTTTC GGCGTCGAGA ACCGATCGCT AATACCCGTT TCCCGCTTGG
TTGACGCGCA TAGTGGGTCG ATTGCTTCGG TTTTATTTCC CGCTTGGAGA CAGGATCAAG
CACATGTGGC GGCGAACGAT CGCCTTATGG TCACCACGGG GAACGACGGT GAGATTGCTT
TTTGGGACCT TGGCGACATG TTGTGTGCCG AGGGTGCTCT GAACCCTTTG GATATCTTGA
ATCTAGGAGA ATCGACGCTG GAAAATCTCT GTTTGTCGGA TCAACCAAAG GTTTTGTCTG
CCATTCCCCA TGGTCGAAAA CCCAACTGGA TGGTAACAAG TTTACACGAT CCAATATTTC
CAACTACTGT GTTCATTGCC GATACCTCCA ACGAGATCAC AGCTTACCAA ATGCCTACCA
GATGA
|
|---|
| Protein sequence | MIKEGNVTST KLKGHQGPVL CLAHSGTNTS GVSTASQSSA AASLLSGSED STSRVWDLRS
NCVRASLCIK APGAVLSVSF GPRWTDPSDS IARDGPSQVR RDYSVFLSVG NSVLGYDLRY
ASSPVIVEPS VDLSNVLESA DEINQIAFSP PRRQRSLHLA AADDAGCVRV TDAFALSSTS
SKNHRILHHG ISETNMAMVT SVNFRPHCKH LELASGGTDC TVKLWDVMKP KHPISSHLIA
NSDAGANQVC NPPMVHTMAW SPSGRLLVAG LGDGSCCIFG VENRSLIPVS RLVDAHSGSI
ASVLFPAWRQ DQAHVAANDR LMVTTGNDGE IAFWDLGDML CAEGALNPLD ILNLGESTLE
NLCLSDQPKV LSAIPHGRKP NWMVTSLHDP IFPTTVFIAD TSNEITAYQM PTR
|
|---|
| |