Gene PHATRDRAFT_47265 details

Gene Information

• Locus tag: PHATRDRAFT_47265
• ID: 7202355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: -
• Start bp: 132045
• End bp: 134250
• Gene Length: 2206 bp
• Protein Length: 709 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002181663
• Protein GI: 219122668

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.285264
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTAACGGTAG TAGGTTCACC AATGAATAGT ATTCGGAAAC GAAAATAGGT CGGATGCTGC 
GGTAGAGACT GAGGGGATGA GGACAACGAA AGCATTCTTC CATCTTTCGC ACTATCACTA 
CCACCATCGA ATCATCCAAG CAACACGTTT TCAAAGTGCA GCGACACATT TTATTCCTTC 
GAAAGACCTC AAACGAAGAC ATTTCAAGTC GTACGGCGAT CTTATCTCCA AAACAAATGA 
ATTGATCGAT CTGGTGAAAA ATCCGGTACG AGCGATCGCT GAAGCCGGGT CGCCGATCAC 
GGTTCATGAC TGTTTTCATA CGTTGGAAGC GTGGATGGAG TACGCGATGG ATGAAAAAAC 
GATAGAAGCC CCGTTACAAG CAAAGCGGCT GCTGGATACG CTGGAAAGGA ACACAATTTT 
AAGGTTCGAC TCAGTTTTTG TACCGAAAGC CTCATTTTAT GAGGTCGTCA TGCAGGGCTT 
CGCTGTTTGT AACGGCGGAC GAAATGCGGC TGAGCACTGT CAACATATCT TGCAGAATAT 
GATTTTTCAG TGCCGACGCT ACTCACAAGA GTCGAGGTCG GAAAGACGAA TTCCCCCGGT 
GGAACCCACA ATTAAAGCTT TTAATATCAG TATCAATTGT TGGGCGAAAA GTGGAGCGGA 
TGATTCGGGC AAGCACTCTG AAGCGGTTTT AGAGTTGATG GGCACATGGA AAAGAGAATG 
CGAGGAGAGT AGTGACGTGT CATTGTACGT TGGCTGTCTA CCTAATGGAG CTACGTTTGC 
AAGTATTATG GATGCATGGG CAAAGGGTGA CTCAGGCTTG GCACCCCATA GAACATTGTC 
AATCTTGAAA AGTCTGATTG CCTCGGTACG TGCTGGAGAT CTCCATGTAT CAGTCCTTCA 
ACCGCGCTTA TTTAACATTG CATTACATGC ATGGGCACGT AGTGGGTTGG GTCGCGAAGC 
TGCACGAAAA TGTGAAGACA TTTTACAACT CATGAGTACA CTGGAACGCG AATACGGGGT 
TAATGCATCT CCAAATACAA CAACGTACGC TGTTCTTATA GATGCGTGGG CCAACTGTGA 
AAAGGAGGAG AAAGATGGTG AAGCCGCACA ACGTGCTGAA TCTATCCTTT TTAAGATGAT 
TCAGCTGTAC CGAAATGGAC ACGGCGTAAA GCCAAACAAA GTGTGCTTTA CTTCGTGTGT 
AAATGCTTGG TCATGGTCTG GACGTATTCA TGATGCACCA GAGAAGGCCG AAAGGATTTG 
GCGGACGCTT GATGAGCTAC ACAAGGAATC TGGTGGTCAT CCGGACTTCT GCCCTGATAC 
TGAGATCGGG AATGCAGTTT TAGCAGCGTG GTCAAGAGCA GTTCGAAAGC CCGACTCAAT 
CGGTCGGGCG CTCGCGTTCT TGGAAAAGCT GAAGCTAAAC TTTACAACTG ATCTTGTCAG 
TTATAACACG GTGCTTGACG CATTGGGGAA GCGTGGTCTA TCCTCAAAAT CCTTAGATCT 
TCTGAAGTGG CTCGAAGTAG AATCGAAGGA CCGCGATTTG TCTTTACAAC CAGATGTTCG 
AACGTACAAC AGTGTGCTCG CATCAATTGC AAAGGATGAG GAACGTAGAT GCCCCAAAAA 
AGCTGAGGAG CTGCTCCAAA CTATGCAAGC AAAAAGCAGC GAAGGAAGAC ATACGATAAA 
ACCTGATCGG GTCTCGTACA CAATTGTTAT CGACGCATGG TCGCGATCGG ACGATCCCAG 
AAGAGTGGAA AAGGCAAAGG CCCTGTTCGT CCAATTAATC AACGAGTTTC AGAAAGGAGA 
TCAGAATATG CAGCCCGACG CTTACGTATT CACAGTTCTC ATGAAAACTT GTCTGGGGGT 
AACTGGATCT GACGAGAGAA AGAGGTTTGC TCTGCGACTT CTAGTCGATA CGATGAAGTT 
GATGAAGTCT GCAGGCTTCG GTCCTCCGAA CCATGTCACC TACGCCACCT ACACGAAAGC 
TGTGGAAAGA TTATGTGACA ATGATGAGCT GAAGAGAAAG CTTCTGATTG AAGCATTCAA 
AGACTGTGCT GCAGGCGGTC ACGTATCTAA GAAGGTTGTA TTTGCCATGC GCCCCCTCGG 
AATTGCTAGC ATCCAGATGA AAACAAGCTG GAGCAGAAAT GTTCCGAATC GGTTTAAACC 
AGATACCAAC AAATGGATGG ATTGGAGTGC ACTAACTGTA AGCTAA 

 

Protein sequence

MRTTKAFFHL SHYHYHHRII QATRFQSAAT HFIPSKDLKR RHFKSYGDLI SKTNELIDLV 
KNPVRAIAEA GSPITVHDCF HTLEAWMEYA MDEKTIEAPL QAKRLLDTLE RNTILRFDSV 
FVPKASFYEV VMQGFAVCNG GRNAAEHCQH ILQNMIFQCR RYSQESRSER RIPPVEPTIK 
AFNISINCWA KSGADDSGKH SEAVLELMGT WKRECEESSD VSLYVGCLPN GATFASIMDA 
WAKGDSGLAP HRTLSILKSL IASVRAGDLH VSVLQPRLFN IALHAWARSG LGREAARKCE 
DILQLMSTLE REYGVNASPN TTTYAVLIDA WANCEKEEKD GEAAQRAESI LFKMIQLYRN 
GHGVKPNKVC FTSCVNAWSW SGRIHDAPEK AERIWRTLDE LHKESGGHPD FCPDTEIGNA 
VLAAWSRAVR KPDSIGRALA FLEKLKLNFT TDLVSYNTVL DALGKRGLSS KSLDLLKWLE 
VESKDRDLSL QPDVRTYNSV LASIAKDEER RCPKKAEELL QTMQAKSSEG RHTIKPDRVS 
YTIVIDAWSR SDDPRRVEKA KALFVQLINE FQKGDQNMQP DAYVFTVLMK TCLGVTGSDE 
RKRFALRLLV DTMKLMKSAG FGPPNHVTYA TYTKAVERLC DNDELKRKLL IEAFKDCAAG 
GHVSKKVVFA MRPLGIASIQ MKTSWSRNVP NRFKPDTNKW MDWSALTVS