| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47255 |
|---|
| Symbol | |
|---|
| ID | 7202346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 92246 |
|---|
| End bp | 93652 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181658 |
|---|
| Protein GI | 219122658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000483582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCAAGGAGCC TATTGCCCAA CTGCTACGCA ATTTTGGTAC CGAGGTTTTT CCGAGTCATT
GCCCTTATTT GGAAGAAGCT CTCTAACAGA TTCTTGGTTG GGGAATCCTG ACGTTGCTTC
CTACCAGCCG ATTGCCATAC TTTCCTTAGG CAGAACCGAA ACACTATGAT ACGCCACCGT
GAGACTACAT CCATGAAACG ACAACGAAAG CAGAGTTTGC GCTACAGCAG CTTTCATAAG
AAATTTTCTT TTCAAAGATT CGAGCTTCCA TTCCTTGTTG GGAATATCAT GTTGCTTCTT
CTGGGCGTGA TGGTAAACGG TTTCGTCCCG ACGTCATCGA CTGCTTTCTG GTCGGCTGCA
ACTGCAACTT CTACGGACGA GCGAACGCTC GGAGAACGAC GAGCTTTGAC TCGTGGGATA
TCCCCAACGT CCTGTTGGGC TACTACCTTT ACTGCTAGCA GCAGCACTCG TTGCAGTCTA
TTCTTTCGAT CAACGGAAGA GACTTCATCC GAAACAGAAT CGTCGTTGTC GGGTACAACG
AGTAACAAGA GTTACAACCC CGCTTTCAAA ACCGTGCTGA CGGATCTCGC CCAACCCAAT
GCACGGCTCC CCTACCGGTG CTCGGGTCAG GCCTTTTCCA AACTCTCCTC CAGCGAAAGC
GTGACGGTTC GACTGATGCA AAAACGAGAC ATTGAGTTCC TGACGGATAT GTGCTGTCGA
GAATACGGCA CGACGTGGGA CGAGAAAGAA AGTGTGCAAG CGGTAGAATC CATATTAGAC
GTGGCATCCC TTCGGATTCT CGTACAAGTG ACACTGCAAA TGAAGGTGCC ATCCAAGTCT
CAAAAACTTC CTCCGGACCA CGTCGTGCTG GTAGCAACCG TTGACAAGGT CAACAGTGAT
ACAGTATCGC GGCCGTCTCC ATCATCCACC ATCGTCGGCA TGATTGAAAT TTCGAATCAG
CCAGCTTTGC CAGAAAACAA TCCGGGGCCT GTCCCCATTC CTTTGTGGAT GAAAAACTTG
TATTGTCAAG TGCTCCACGT AGTGCGTGGA CCGTCCAAGA TGCCCTACAC GACGACGCAA
GGATGGATTG CCAATCTATT GGTCAGCGAC GAATGGCGTG GACAAGGTGT AGGCAAACTA
CTCGTGCGAG CGGCCGAGGG AGTGGCCCGT ACCTGGGGTA CCAGCTCAAT TCATTTACAC
TGTGACGCCG ATAGCGTGAG TGGTAAAGTA TCGCAGAATT TATACGACGG CCAAGGCTAT
CGTAAACTTC AAGGCGAAAC GCAGTACGAA TGGATGAATG GTACCGATGG CGCCGTGGGT
CCGAGTCCGT TGACTTCAAG TGTCTTTGTC ATTGAAGGAG TGCCGTTATT GTATTTGAAG
AAGGATTTAG AATACGAATC CGGTTAG
|
|---|
| Protein sequence | MIRHRETTSM KRQRKQSLRY SSFHKKFSFQ RFELPFLVGN IMLLLLGVMV NGFVPTSSTA
FWSAATATST DERTLGERRA LTRGISPTSC WATTFTASSS TRCSLFFRST EETSSETESS
LSGTTSNKSY NPAFKTVLTD LAQPNARLPY RCSGQAFSKL SSSESVTVRL MQKRDIEFLT
DMCCREYGTT WDEKESVQAV ESILDVASLR ILVQVTLQMK VPSKSQKLPP DHVVLVATVD
KVNSDTVSRP SPSSTIVGMI EISNQPALPE NNPGPVPIPL WMKNLYCQVL HVVRGPSKMP
YTTTQGWIAN LLVSDEWRGQ GVGKLLVRAA EGVARTWGTS SIHLHCDADS VSGKVSQNLY
DGQGYRKLQG ETQYEWMNGT DGAVGPSPLT SSVFVIEGVP LLYLKKDLEY ESG
|
|---|
| |