| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47253 |
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| Symbol | |
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| ID | 7202345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | - |
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| Start bp | 88157 |
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| End bp | 89986 |
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| Gene Length | 1830 bp |
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| Protein Length | 473 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181657 |
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| Protein GI | 219122656 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0136621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AATACTATCC CGTTCTTTTC TTCCACAGTT CTCGCCATTG ATTACTCAAG TCAACTTTGA
AGCTGTTGAC CCGTTGGAAA ACCTTTCATT GGCAACTAGA ACACGGATTA CATCGGTTGT
GACCCACCAA ATATCCACGT GGACGGTATG GGCTTTCACT TGCTTCCTCA GGGGACGGGG
TCCGAAGAGA AAGCCAAATC CAGGTAATCC TTTTTGCTTC ATCGTAAATA CTTTCTCATT
CTCAATTGTA CCGTCGCTAG TCGACTGCTT TGGTCATTCA CGAATCAGAG AGATATCCGG
ACTCTCAGGC GTTCTCACAC AAATTTCGTT GCTCATTCCT TTCCGTATAG ATCTCATTTA
CGATGGGCTG CTCTCTTTTT GGGAGAACTG CGGGACGGCA GTCCAACCAT GATCAATATG
CAGAGCGCTT ACTTGATCGT ATCCCAGGGA TACTCCGAAA AGCAGGCAGG CATTCTCTTT
TTCGTATTTG GAATGAGTCA ATTTATCTTT CAGACGCCGG CCGGATACTT GTACGATTCC
ACCGAACGCA AAGTGTTGTG GTTGTCGATC GCCGCCACGG TCAGCATGTG TTTGACTCTC
GCCACGGCAT TCTTTGCCCA ACCCATGGGG GCCAACCTGA CCTTTATGAT GCTCGTCAAG
TTCGGTCAGG GCGCCGCAAC CTCCTTTATT CCACCCGGAC TCAACAGCAT TACACAAGGG
ATTGTTGGCT CGGCGGGTAT GACGACACAA GTTTCCGTCA ACGAAATGAT GAATCATACG
GGAACGGCTA TTGTCGTTCT AACTGCCAGT TTGATTGGGG TCCTGATGTA TCCTAGTTTG
AAACTTCTCT TTGTAGTCAG TCCAATTGCT TGTATCGGAG TCGTATACTT CTTGAGTCGC
ATCCGTCCGG AAGATATTGA TCACGAGGCC GCTCGAGGTT TGGATCAGAA AGTGAAAATA
CCCACGGACG GAATCTACAG GCCACCATCA ACTACGACTC CTACAGACGC TGGTGACGCG
CCTTTCGGGA AAGCCGCCGT GGACGATCAG CCCAGTTTTA CACTGAATTC CGATTGGCAA
AGCATTGCTG CCTCAGCCTT TTCGAGTGGC AGCAATCTTA AGGCCGATAG TCCTTTGCGG
GTTCTGCGAG ATCCAATTCT ATTGACCTTT ATCCTGGTAT GCTTCTTGTT CCACACCTCG
AATGGTACCG TTCTACCGTT GGTCATGCAA ACACTGGCGC TCGGCAGTGG GCGAGCTGGA
ATTCTTATGA GTGGATCGTG CATTATCGTG GCGCAGCTTT TCATGGTCAT CAGCGCGAAA
GTTTGCGGAG AATATTCCGG AAAGTACGGA AGAAAAACAC TTTTTTTGGT CGGTCTTTTT
ATAGTACCTA TCCGGTGTCT TATACTGGGA GTGCTGTTAG AATTTAGAGG GGCTGGCGAC
GCATCTAGAC TGATGGAGGT TGCTATTCTA TCGACGCAAA TCTTGGACGG TATCGGCGCT
GGCGTGTTTG GGACAATGTA TATTTTGGTC ACCAGTGACA TTAGTGGTGG CACGGGTCGA
TTCAGTATGA CGCTAGGGTT GACGACGGCA GCCATGTCCA TTGGTGGTAC AGTGTCTGGT
TATTTGGGGG AGTCTCTCGC GCAAGATCTG GGTTACAAGC AAGCCTTTTT CATTCTCATG
TTTATGTCGC TCGTGCCGGC AGTGCTGTAC CTTGTTTTCA TGCCGGAAAC GTTGGCCATC
TTAGCAAAGT CTTCGAGCGA TCCACGCGGT ATTGCCAGCA TCAAGGAAGG GGAACAAGAG
AAAGTAGGAA ACTACAAGGA GCTTGTTTGA
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| Protein sequence | MINMQSAYLI VSQGYSEKQA GILFFVFGMS QFIFQTPAGY LYDSTERKVL WLSIAATVSM
CLTLATAFFA QPMGANLTFM MLVKFGQGAA TSFIPPGLNS ITQGIVGSAG MTTQVSVNEM
MNHTGTAIVV LTASLIGVLM YPSLKLLFVV SPIACIGVVY FLSRIRPEDI DHEAARGLDQ
KVKIPTDGIY RPPSTTTPTD AGDAPFGKAA VDDQPSFTLN SDWQSIAASA FSSGSNLKAD
SPLRVLRDPI LLTFILVCFL FHTSNGTVLP LVMQTLALGS GRAGILMSGS CIIVAQLFMV
ISAKVCGEYS GKYGRKTLFL VGLFIVPIRC LILGVLLEFR GAGDASRLME VAILSTQILD
GIGAGVFGTM YILVTSDISG GTGRFSMTLG LTTAAMSIGG TVSGYLGESL AQDLGYKQAF
FILMFMSLVP AVLYLVFMPE TLAILAKSSS DPRGIASIKE GEQEKVGNYK ELV
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