Gene PHATRDRAFT_47243 details

Gene Information

• Locus tag: PHATRDRAFT_47243
• ID: 7202335
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 10094
• End bp: 14513
• Gene Length: 4420 bp
• Protein Length: 850 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002181469
• Protein GI: 219122266

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.24929
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GACAAGTTTA TGCTGTAGCC AAGAAGCACC TCCCACCTTG TGTGTAGGAC GTACTCTGTG 
CGGTCAATCA TTGGGGACCG GAGTACGCAC TAGTACCAAC GCACCTCCAT TACAAAGGAA 
AGCATATCAT TCGGCAAAGA TATCGTAGAG GCTGGTTTGT TGTTCCGGAA GGAAATCGAC 
CGCTATTGAC GGCCGAAGAC AAGTCTCCAT GGACTTCGCG AATGGTTTTG GAGACAGTAG 
TGATGACCTG ATGGAAAACG CAAGGATCGT CAGCCCTTAT GGCGATGGAG AAACCCAAGC 
GTTTCCTGCT GATCCGTGGG CAAATTTTCA GTACGCACTG CCTGAAGGGT CCTCGCAGTA 
TAAATATCGT GCTTCTAGAC AAAGACCAAC GATTGGAGGA TCACGATCTC CCTCGGAGCC 
AATTCCCACC CCACGAGAAA GGATGGTGAC ATCTTCTAAG ATCTCAACTC CTCACCGACA 
CGGTATGGTA AATCGAGGCC ATGCTAGTCG ATACGAATAT TCTAGTGACA AGCGATGCGA 
TGACGTACAC GTAATATTTA CAGATCCCTC CGACGGTGTT GGGATCAGCG TTGAAAAAAG 
GAGCCAACAG GACTTGTTGC GACAAAAGGT TCGGGAGGAC ACCAGTCGTA GGAGCTTACA 
ACATTCAACC AGCGCACAAA GTATGTACCG GAAACGTAGC GAAAACAAAG GTGCGTTTCC 
TTCATTTCCA CAATTAGCGC CGAGCAAAGA GAAAGCACTG GTACGTACTC CGAACACCTA 
AACTTGAATG CATTGACCAA TTTTGAAAAG TGAACTACAC TCCTCTAAAC TACGCCTTCA 
ATTCGTATTC TTTTGTCTGA AGCGAGGCCA GCGTCCATCT AAACATACTC GGGACCATAT 
CTCACGGCAT ACTTCGCCAA AATCATCAGT GGAAATAACT TCAGAAAGCA CAAACGCAGA 
GACCGATGGT CTAAATTTGA ATTGGGCATT CTCGCGTGTT CAAGTTCGAG CGAATAGTGA 
AACGGAGTCA ACGACGGTTT GGCTAAATAC TGATCACAGG CAGGATTTAG AAGGAGAAGA 
CATTTGGTTA CAAGAAGAAC ATGCATTCCC TTTGTTGTCA ACGGGGGCTT CAAGCAGATT 
TTCGGGCCCA TCTGGTAAAG ATGGCCTCCG AAAACGTACT GATAAGAAGT TAAATCGTGT 
CCGTTTTGCC GAACCGATAC AGAAGCCGCG ATCTGTCCCT TTTCTGAAAA CTGTTTCACG 
GGAAACTATA CGGGAAGAAT CCTCAGATCC TCGTTCCAAA AAGATCACAC ATAGTGACAA 
TCGCGCGTGG TTCGTGGCCC AACCGAAGTC AATTCTCCGT CGGCGGCGTT TCGCTGGCGA 
AACCGTGTCC CATGACCCAC AGTACCCCCA GAAGAATCGC CCATCCTCTC ATCGCGCAGC 
TCCACAACGG AAGTCTGCTA CATCGTTTTT GGATACACAA GGATCCCTAC TCTCTCCCAT 
TCATTCAGAT AGGCGGCCTT GGGACCGCAT CTCTGAAACA GGCTCGGAGT CACTCAGTCC 
TTCGTACAGT GATGTTGAGC GAGAGAAACG CGTTAGTCTT GGTCCCTACC ACCTGCAGGA 
GCTAAATGAG ATGTATCCCG ATCCTCCTCT TGAGTTGCAG GTAAGACATT TTTGACTTTA 
CAAAGCCCTA TCTTTTGTAG CCGACCTACT CACCGACATA CATTTTCTTT TAGTTCGACG 
ACGAGTCAAC TGTAGTACCA GCACGCGCTT CTTTCATCGA CACTGTCGCT GCTGTTGTCG 
TTCAAGCCGC TGTTCGTAGA TTTCTTGCCC AAAAAGTGAT GCATGAGATG GTCGGCAAAG 
CATATTCCTT TCCGCATTTA GAATCTGACG ATAAGAAATA TCGACCATTG TCGTCGCGAA 
AGGTAACTCC TGAAAAAAGG TCGTCCCGAA AAAGTATGGT AGGAATTTGG GAGGAGCAGT 
GTTCATAGAA GTCATGGCTG CGATAAAAAT CCAATCTGCC TTCCGAGGCT TTTGGGTTCG 
AGATTCGTTG AATGTGGATC ATTTTTGCGC GACTATGATC CAGAAATGGT ATCGACGACA 
TCATCAGAGG CACCACTATT TTGCAGATCT TTCTCGGATC ATACTGGTCC AGTCCATTTG 
GAGGCGCAGT ATAGCCAGGG AGCACGCTGC CTTTTTCCTT GGGAGCGTAA TTACAGTTCA 
GTCGCTGTTT CGCTCGTACA GCGCTCGCAA AAAGCTCTAC TCAGGACTCA CTTGCCTACG 
AAAGGATACT ATGGCAGCTG TAGTGATCCA ATCGCACTGG CGTACATATG CTTGCGAATG 
CAACTTTATT CGCGATCTTG TCGATATTTT GATCGTTCAA AGTGTTGTGA GAACTTGGTT 
AGCAAGACGA CACCTGTCAT CACTACGCTC CAGGGCCCAA AGTATTTCCG GCAAAAAGTC 
ACCAACAGTA TCAAAAAAAT ACGCGAATCA AGTGGCGGCG CAACCTACTG GAAGTCCTCG 
ACCTGGAGAG GCCAATCGTA ACTCGGCGAC AGGGCAATGC TACTCCTCGT ATAGGTCTGT 
CGAAGAGAGT TCGTTCAGCG CTATTCTTGG CAATATAAAG AGCAAGGAGA ACAATCACCT 
CATTGTGTTG ATTACATCTC AGTCTCTCTC GCGCAATCAA GCTTCCACAA GAAGTAATAT 
TGGTACAATC TTACGCGTCC ATAATGTCTC ATTCGAGGAA GTGGATGGAG CAAATCCGCT 
AACCCGAGGA CGACGCGACG AACTCTTTGC TATATCACAA ATGCGCGGCG TGTACCCGCA 
GTTCTTTGTG GTAGACTATG AAACAGGGCT CACGTTATTT TTCTGCAACA GTGATTCTTT 
TTTCGGTGCC AATGAAGAAG GCTCTCTACC CAGGATACTC AATATTGCTG GTGTTGTGCA 
GAGCGCGATC GGAGGACATC AAGAAAGAAA TAGTACCATA GACGAAGCTC CTAAAGCAAA 
CAAGCACCTG TTTGAGCCAA AGAGGCAAAG CTCACATACT ACGGTTTCAA TTGACAGTGA 
AACTTCGGAG CCCTCTGTAG GACGGAACAG TTTGCTTTCG ATGTGGAAAA ATCTTGACAA 
GAAGAACACA TTAGTATTAA ATGGACACAG GAATTGACAA CAACCTGATT GTGAACGCGG 
AGAGAAGTTG TTAGCTGTTA GTCTGTACAT GTTAGTAGCA ATTTCTACAC TAATGCGTAC 
GACATGAGTT CATGCATGCA ATTTAAAGGA ACCCCTTCCA TTCGCCGCCT CAAGAAAGAA 
AACCGTTACT CTTTCTGTTT TATCAAGGCA GACAACTCTG AGGCAAACCC ATGCATTGTA 
GCTGTCTGCA AGCGCGAACA AGCTTTTGAC ACACTTTTGA TTATTGCAGC TGATGGCAGA 
TGCGACAGGG CACCGTCGTG GTGTCTCGTA ACAATTGTCT TAATAAGACG AGCAGCTCGC 
TCAACGCAAT GTGCATCACG ACTATTGAGA AGGGCATTGA GACAGGCATC GTAGCACCTT 
TCATCCGGCT CTATATCGGG ACGACCATGA ATGTGCAAAT CTAACATGTA GGACAATACC 
ACGCAAGCAT TTTCCGCAGA CTCCTTGGTT CTCGCATTTC TGAGAGACGT CAGTATTGCT 
GCAAAGACAA GTCTATCGAG CTTCAGCTTG TTTGAGGGAT CGGAGTCTAA AACCTGCATT 
TCTCGAAACA AATCGAAGGC AACCCTGCCA GATTTTACGT TCCGAAGGGA AGCGAAAGCA 
AAAATAACAG CAGTATACGC TCGACTTGTC GGTTGAACAC CCAAATTCTT CTGGTGTCCA 
AGTGTCTGCA ATGCTAAATC AGCGGACTCC TTGGATCTAA AGTTCGCCAT TGCTGAAATT 
ACAGCGGTGT ACAACCCAAC AGATTTCGGA TCCCATTGAA AAGTTCCTTT CTTAACCCCC 
GCCTCAATAC GATGTAATAA GGTAGAAGCG GTCACAGTGT CTTCGTACTT TTTCGTTTTT 
ACCAAAGCAT TGATGAGAAC CTGGTATGGA AACATGTCTA CAGTAAGCCG GTTCTCACCA 
TCTATCAAGA CGTCGAAAGC CTCTTTGAGC GAGTTTTCCT TACAAAGCAA GCCAATGCAC 
ATGTTGAAGG TGCCCGAATT TGGAGCACAT GGAAATCCGT GTTGCTCCGA GAGATTTATC 
ATCGAATTCA GAAGGGATAA GACATATTTC CCCCCGCTCC CTTGAGACAG GCGGAGCCAG 
CCATGAATAA CAAAATTGAA TGTGTCTGTT GTTGGAGGCG GCCCAGCTTG GCCAATAGCT 
GCTTCGACCA TAGCGACAAC ATGAGCATGC GCTTGTAGCA TTCTTCCACA ACGGACTTGA 
GCTTCCATGT AGGACATGTG TGTTGCTAAG TCCGGTCGAA 

 

Protein sequence

MDFANGFGDS SDDLMENARI VSPYGDGETQ AFPADPWANF QYALPEGSSQ YKYRASRQRP 
TIGGSRSPSE PIPTPRERMV TSSKISTPHR HGMVNRGHAS RYEYSSDKRC DDVHVIFTDP 
SDGVGISVEK RSQQDLLRQK VREDTSRRSL QHSTSAQSMY RKRSENKVEI TSESTNAETD 
GLNLNWAFSR VQVRANSETE STTVWLNTDH RQDLEGEDIW LQEEHAFPLL STGASSRFSG 
PSGKDGLRKR TDKKLNRVRF AEPIQKPRSV PFLKTVSRET IREESSDPRS KKITHSDNRA 
WFVAQPKSIL RRRRFAGETV SHDPQYPQKN RPSSHRAAPQ RKSATSFLDT QGSLLSPIHS 
DRRPWDRISE TGSESLSPSY SDVEREKRVS LGPYHLQELN EMYPDPPLEL QFDDESTVVP 
ARASFIDTVA AVVVQAAVRR FLAQKVVPKK YGRNLGGAVF IEVMAAIKIQ SAFRGFWVRD 
SLNVDHFCAT MIQKWYRRHH QRHHYFADLS RIILVQSIWR RSIAREHAAF FLGSVITVQS 
LFRSYSARKK LYSGLTCLRK DTMAAVVIQS HWRTYACECN FIRDLVDILI VQSVVRTWLA 
RRHLSSLRSR AQSISGKKSP TVSKKYANQV AAQPTGSPRP GEANRNSATG QCYSSYRSVE 
ESSFSAILGN IKSKENNHLI VLITSQSLSR NQASTRSNIG TILRVHNVSF EEVDGANPLT 
RGRRDELFAI SQMRGVYPQF FVVDYETGLT LFFCNSDSFF GANEEGSLPR ILNIAGVVQS 
AIGGHQERNS TIDEAPKANK HLFEPKRQSS HTTVSIDSET SEPSVGRNSL LSMWKNLDKK 
NTLVLNGHRN