Gene PHATRDRAFT_42123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42123 
Symbol 
ID7202383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp248048 
End bp249079 
Gene Length1032 bp 
Protein Length343 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181686 
Protein GI219122715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAGC GATTATCGGT ACAATACTTT AACGAAGCCG GGGCTCGAGA ACCAGGCATT 
GATGCCGGTG GCTTATTCAA AGAATTCTGG ACAGATCTGT GTGCAATTGC TTTCAACCCC
AACTACGCAC TTTTTTCGGT CACCGATGGC GCCGGAAACT GCTTATACCC AAACCCCTCG
TCCGGTGCTG CCCATGGAAC ACCAGACCAT ATTGTCTTGT TTGAATTCCT GGGCCGAATA
TTGGGTAAGG CTCTCTTTGA AGGCATCACA ATCAACCCAC GGTTTGCTCA TTTCTTTCTG
AGTTTTCTTC GAGGTGACTA TAACTACCTA CACATGTTGG CAGACCTGAG TACCGTCGAC
CCGCAGCTTT ACAACAATTT GATGTTTTTA AAGGCCTATG AGGGTGATAC AACAGATTTG
TGCCTCACTT TCAGCATAAT GCATGATCAA TTTGGTGGGA ACAAAGATGT CCTCTTAATT
CCAGACGGAG CAAACGTGGA AGTTACAAAC GTCAACAAGC AGCGCTATGT TGAACTTGTT
GCAAAGCACT ATGTTGTCGA TCGTGTCAAA GATCAATCAG AGGCATTCAC GCGAGGACTC
TGGGAAGTCA TTGATCGGTC TTGGCTGCGT CTTTTTAACG AGCCCGAGCT TCAAGTTCTC
ATCAGTGGTG TATCGGATGG AAAACTTGAT GTCGAAGATT TGCGGGCACA TTCACGCTAC
GCTGGTGGAT TCACTGGAAT AGACAGAACA GTCAACCGCT TTTGGAGTGT CTTGTCTTCA
ATGAGCAGTA AGCAGCAAGC TGATCTATTG CGTTTCGTAA CGTCTTGCGA GCGTCCGCCA
CCCCTTGGAT TTGGGAGCTT AAATCCTCCT TTTACAATCC AGCGGGTGGG TATTCTACGA
GACGGAGATA AGCTACCTTC AGCCTCGACG TGCTTTAATG TGCTGAAGTT ACCTACGTAC
AGTAGCGAGA AGGTACTGAA GCAACGTTTG CTCTACGCTA TTGAATCCGG AGCCGGCTTC
GAGTTGTCCT AA
 
Protein sequence
MRQRLSVQYF NEAGAREPGI DAGGLFKEFW TDLCAIAFNP NYALFSVTDG AGNCLYPNPS 
SGAAHGTPDH IVLFEFLGRI LGKALFEGIT INPRFAHFFL SFLRGDYNYL HMLADLSTVD
PQLYNNLMFL KAYEGDTTDL CLTFSIMHDQ FGGNKDVLLI PDGANVEVTN VNKQRYVELV
AKHYVVDRVK DQSEAFTRGL WEVIDRSWLR LFNEPELQVL ISGVSDGKLD VEDLRAHSRY
AGGFTGIDRT VNRFWSVLSS MSSKQQADLL RFVTSCERPP PLGFGSLNPP FTIQRVGILR
DGDKLPSAST CFNVLKLPTY SSEKVLKQRL LYAIESGAGF ELS