Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37632 |
Symbol | |
ID | 7202553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 583155 |
End bp | 583970 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181758 |
Protein GI | 219122866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATT CTCCCATCGC AGCAAACTTT GAGGGAAACA CGAAATACGA GTCTCTTCCA CCACGAGATT GTCAAGGCTA CGACGGGGAT CTCGGCAAGA ATGGAAGGAA ACTTCAACAT CTCGGTGACA ATCGACAGTA CTGGCGAGAC ATGATTCTCG GTGTTAATGA TGGTATCATT TCCACCTTTC TACTGGTAGC CGGTGTGGCC GGTGGTGGTC TGACATCTCG AGACATCTTG CTTACATCCG TTAGCGGTGC CCTCGCGGGG GCAGTCAGCA TGTGTGCTGG TGAATACATT GCCACAAAAT CACAAAACGA AGTTATTCAT GGAGAGCTGG CTTTGGAAAA ATTTCATGTA GAGAGGTATA GAGATGAAGA ACTTGACGAA CTGGGTGAAC TCTTGGACTT GATCGGTATT TCAAAGGACC AACGAACGTT GCGCAAGCTG ATTCACGAAC ACTACGGTCG CAATCCGGAA GCCCTGTTGC AAATCATGTC TGCTCTTGAA TTTGGTGTTA TAGATAAGGA AGAGCGTTCG CCGATACGCG CTGGTCTGTT TTCGTGTGCA CTCTTTGCAA TAGGATCCCT GCCTTCCGTT CTACCTTTCG CCTGCTGCGG TGAAAACCCG ACAATGGGAC TGATTGTTGC AACAGGTTTG ACAATAGTAG CTCTCATGAT TGTGGGTGCG GTCAAAACGT GGGCTACTCG AACGAATTGG GTATCCGCGG CGTTGGAAAA TCTTATAATT GCAGGATTCG GGGGTGGTTT GGCCTACCTG GTGGGCATTT TATTCGACCA ATTGGTAAAA GTGTAG
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Protein sequence | MINSPIAANF EGNTKYESLP PRDCQGYDGD LGKNGRKLQH LGDNRQYWRD MILGVNDGII STFLLVAGVA GGGLTSRDIL LTSVSGALAG AVSMCAGEYI ATKSQNEVIH GELALEKFHV ERYRDEELDE LGELLDLIGI SKDQRTLRKL IHEHYGRNPE ALLQIMSALE FGVIDKEERS PIRAGLFSCA LFAIGSLPSV LPFACCGENP TMGLIVATGL TIVALMIVGA VKTWATRTNW VSAALENLII AGFGGGLAYL VGILFDQLVK V
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