Gene PHATRDRAFT_37588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37588 
Symbol 
ID7202432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp484627 
End bp485685 
Gene Length1059 bp 
Protein Length352 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181567 
Protein GI219122470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.860566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTTT TTGTCCACAG CGATGCACAA AACTTTTCGT CGCAACTGGC AAGTACGAGT 
CTCCCCATGC CGAATCGCAA CAGCCCTTCA AGCATGGATC CCAAATCGAT GGAAGGCACG
GACGCTCTCT TGATTAGCCT GGCGAATCGC TGCGGTGGTG ATTTGCGTCA GCTTTTATTT
GTTTTTTTTA GCTTTTTAAA TCGTCGGACA GACTTTTATT TAGTGCCGCA CGAGGATGAT
CAAAAGGAAG GCAAGGCCCG AATGGGATTT CAAGAAGGCG ATGCTGAAAA GGTATTGCTA
GCTTCCTTTC GACACTTTCC ATTGCGAAAG ATTCCTTCAG AGATTCAGAG CAAGGCCGCT
GAACCAAAAG ATGAGTCGCC ATCCGCACCC TACGATGACT CCGATACGTC TTCTCCACCA
AGAGAATCTC TTTTGCCGAA AAAAAGCGAC GCGGGCCCTC TCATTGAAAA CATGAGAGGT
GTACGATTGA CAGACCAAGG TTTACAGATT CCGGTCGGCA ATGGTGGGTC AACACATCGA
TACAAATGGA CCCAGACGAT TGACGAGACG AGCGTGCTTA TTGGCATTCC AAATACTATT
CGCGCTAAGG ATTTGTCTGT GACAATCAAA GCGTCTTTTA TCGCCGTTAA AACCAAATTA
GCGTTACCGC ACCAGCATGA ACCACATACT TTCGTCCAAG GCAACCTGAC CCAGTCGATT
GTGCCCGACG AATCGACGTG GACTTTGGAA GGAGGTGTGC TCATACTTTT ACTGACCAAA
CGAGTAAAAT CGTTTTGGAA AACTGTGGTA GAAGGAGACG ACGAAATCGA TGCTAGCTTG
GTAGACTCGC GGCGGCGCAT TGACGAGTAT GACGCGTCCA CACAAACACA ACTGCGTAAA
ATAATATTTG ACCAGAACCA GGTAAGACGG GGAGGGGCAT CGTCGGATGA AATTCTTGGA
ACGGTTCAAG TGGATCCTTC TTCAATTTCC ATGCCTCCTG GTGTCGAATA TATTGACCAA
AAGCTCCTGG ACAAAAATAC AAACTATTCC AACAAATAG
 
Protein sequence
MFFFVHSDAQ NFSSQLASTS LPMPNRNSPS SMDPKSMEGT DALLISLANR CGGDLRQLLF 
VFFSFLNRRT DFYLVPHEDD QKEGKARMGF QEGDAEKVLL ASFRHFPLRK IPSEIQSKAA
EPKDESPSAP YDDSDTSSPP RESLLPKKSD AGPLIENMRG VRLTDQGLQI PVGNGGSTHR
YKWTQTIDET SVLIGIPNTI RAKDLSVTIK ASFIAVKTKL ALPHQHEPHT FVQGNLTQSI
VPDESTWTLE GGVLILLLTK RVKSFWKTVV EGDDEIDASL VDSRRRIDEY DASTQTQLRK
IIFDQNQVRR GGASSDEILG TVQVDPSSIS MPPGVEYIDQ KLLDKNTNYS NK