Gene PHATRDRAFT_37580 details

Gene Information

• Locus tag: PHATRDRAFT_37580
• ID: 7202428
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 467472
• End bp: 470546
• Gene Length: 3075 bp
• Protein Length: 982 aa
• GC content: 62%
• Product: predicted protein
• Protein accession: XP_002181563
• Protein GI: 219122461

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.252616
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCCGT CTGCCGATTT CACCATCTCC GACTTTCCTC ACAAAGTCCT CAATCCAATC 
GCCACCAATA CCATCGCACC CTCCTATGCG TCGCTTCTCC TCGCCCAACG CCAGCTCAGC 
GCCAATGCAT CCGCCATCCC CAGCCTCAAT GGCGGTGGCG CCCATGGCCA CATGGCCCTG 
ACGCTCACCG CCGCCGCGTA CGCCGAACTG TCCGACGTCC CCTTCGTCAT TCCCGTTGCT 
CCCCCGGCCG ACCCCGAACC GGGCACCACG CAACCTCAAA TCACGGAAAA TAATCGGCTC 
CACAAACGCG CTGTGGCCAT CCACAGCCTC TACGTGGCAG TCAATAATGC CCTCCGTCGC 
CAGCTCCTCG ACGCCGTTCC TCGCGTCTAC GTCCGGGACT TGGAGCACCC CCAGTTCGCG 
TACAGCAAAG TCACCTGCCT TGACCTGCTG GACCATCTCT GGCGCAACTT CGGCACCATC 
TCCGCTTCTG ATTTAAAAAA CAACATCCAG TCGATGTACA CCCCCTGGAA CCCAGCCGAC 
CCGATTGAAA CCATCTTTCA CCGCCTGACC GACGCCATTG CGTATTCGAC GGCAGGCCGC 
GACCCCATCT CCGAAGCCGC TGCCGTTCGC GCCGGCTACG ACGTTCTCGA GCATTCCGGC 
TTGTTCCCTC GTGCCTGCGA AACTTGGCGC ACTGCCTCGC CCGACACGCA TACGCTTGCC 
AACCTCCGTA CTCTCTTTAA GGTTGCCGAC ACGGACCGCA AGCGCACCGT CACCACGGGC 
GCCCTTGGCT ACGCCAATGC CCTTTGTGCC CCTTCCTCTG CCCCCCCTTC GATTGTGTCC 
GACACCCTCA GTCTTCCCTT TTCTGCTCTC TCTGTGTCGC ATTCCTCTGC CGCCACCACG 
GAGAAAACAT ATTGCTGGAC CCATGGCTCC AGCAATAACC GTCGGCACAC AAGCGCCACC 
TGCAAGAACA AGGCTCCTGG GCACCGCGAC GACGCCACTG CTGCCAATCC ACTTGGTGGG 
TCAACCAAAA TTTGGACTGC CCCCAAACCC CCTGAATAGG TCAGAGGGAC GGCTACACCG 
ACACTTAACA CTTGTAATAA CGATCTAATC AATCATATTA CTAGTCTTAA TTTGTCTGTA 
GTCCCCTCCC CGCCTAGTAT TACAACCTCG GCCATTGCCG ACACCGGGTG CACAGGACAC 
TACATTACCG TGTCCTGCCC CCACTTCAAC CAACAGCCAG CCTCCTCTCC ACTCTCTGTC 
CCCGTTCCCA ACGGCGCTAC CCTCCGTTCC AGCCACACGG CCACTCTCGA CCTCCCTGGT 
TTTTCCCCTG CCGCTTGCCA AGCTCACATC TTTCCCGGCC TTGCTTCACA CCCCCTCATT 
TCCATCGGCC AGCTCAGCGA CGACGGCTGC ACCGCCACCT TCTCCGCCAC CCGACTCGAC 
ATCCACCGGG ACACCACCCT GCTTCTTACA GGCGCTCGAG CCCCCACCAC CGGCCTCTGG 
CACCTCGACC TGACCCCAGC CAAGACCGCC AATGCCCTCC TTCCCGACAC CTCCCTGGCC 
GACCGCATCG CTTTTGTCCA TGCGTCCCTT TTCTCCCCTT CTCTCTCCAC TTGGTGCACC 
GCTCTCGATG CCGGGCGCCT CCCAACCTTC CCCGACATCA CGTCCAAACA AGTGCGCAAG 
TATCCTCCCC GCTCGATGGC AACCATCAAA GGCCACTTAG ACCAACAACG CGCAAATCTT 
CGCTCCACTA AGCCCTCCCC CGTTCCGCTG GTGGCCTCAC CCAACCCTCT CCACGAATCC 
CCGCTTGACT TCTGCCCGGC TCCGACCACT CCTCCCGCTG GCCGCACTCA CCATGTCTTC 
GCCGCACACC AACGAGTCAC CGGCCAAATC TACACAGATC AACCGGGCCG TTTTCTCACT 
CCCTCGAGTG CAGGCCACAC GGATATGCTC GTGTTGTACG ACTACGACAG TAATGCAATT 
CACGTTGAAC TAATGAAGAG CAAGTCCGGT GCCGAGATCC TGGCCGCCTA CCAGCGCGCC 
CACTCCCTCT TCACCCACCA TGGCCTCCAG CCGCAGCTCC AGCGTCTGGA CAACGAGGCA 
TCCACCGCTC TCCAGTCATT CATGACCGCC CACCAAGTTG ACTTCCAATT GGCGCCACCC 
CATTTACACC GTCGCAACGC CGCCGAACGC GCCATACGTA CCTTCAAGAA CCACTTCATA 
GCCGGTCTCT GCAGCACGAA CCCGGATTTT CCGCTTCATC TTTGGGATCG CCTCATTCCC 
CACGCTCTGC TTAGTCTCAA TCTCCTCCGC GGCTCCCGCA TCAACCCCAC CCTCTCAGCC 
CACGCCCAAC TCCACGGCGC GTTCGATTAC AACCGCACCC CGCTTGCCCC CCCCGGTACT 
CGCGTCCTCG TGCACGAAAA ACCCGCCGTC CGAGAAACTT GGGCGCCCCA TGCTGTTGAA 
GGCTGGTATC TTGGCCCGGC CATGAACCAT TACCGCTGCC ATCGCGTTTG GATCACCGAG 
ACACGTGCTG AACGCGTTGC TGACACGCTG GCATGGTTCC CCAGCAAGAT TCCCATGCCC 
ACCGCCTCTT CCACGGACCG CGCCCTGGCC GCCGCCCGTG ACTTAGTGTG TGCCCTCCGG 
AATCCCGCTC CTGCTTCACC GTTTACGCCC CTCGACGCCA ACCAGCACCA GGCCCTCACC 
CAACTCGCAG AACTCTTTGA GTCCGTTGCT GTCCCGGCCT CTCCCATCGC CGCACCCGCT 
CGAGCGCCCC CGGTCCCCGC CCCTGTCCCA GCACTTACCC CAGCACAGGT CCGCTTTGCC 
GTTCCCATCG TCACAGCCGA GCACGCCCCC GCACTTCCGA GGGTGCCCAC CCTTGCGCCG 
CCACCTCCGA GGGTGCCCCC CACGGCCACC TATCACTCTC GAACCCGAAA TCCCGGCCGC 
CGCCGTCGCA AAGCACGCAA GCCCCCGCCA ACCCCAACCC TAGTTCCGGC TCATCCACAC 
AACACCCGCA CCCGACCCTT TCTTGCCCCG CCTCCGCCAA CGCAGTCGTC GACCCCGCAA 
CCGGCGCCTC TTTAG 

 

Protein sequence

MSPSADFTIS DFPHKVLNPI ATNTIAPSYA SLLLAQRQLS ANASAIPSLN GGGAHGHMAL 
TLTAAAYAEL SDVPFVIPVA PPADPEPGTT QPQITENNRL HKRAVAIHSL YVAVNNALRR 
QLLDAVPRVY VRDLEHPQFA YSKVTCLDLL DHLWRNFGTI SASDLKNNIQ SMYTPWNPAD 
PIETIFHRLT DAIAYSTAGR DPISEAAAVR AGYDVLEHSG LFPRACETWR TASPDTHTLA 
NLRTLFKVAD TDRKRTVTTG ALGYANALCA PSSAPPSIVS DTLSLPFSAL SVSHSSAATT 
EKTYCWTHGS SNNRRHTSAT CKNKAPGHRD DATAANPLVP SPPSITTSAI ADTGCTGHYI 
TVSCPHFNQQ PASSPLSVPV PNGATLRSSH TATLDLPGFS PAACQAHIFP GLASHPLISI 
GQLSDDGCTA TFSATRLDIH RDTTLLLTGA RAPTTGLWHL DLTPAKTANA LLPDTSLADR 
IAFVHASLFS PSLSTWCTAL DAGRLPTFPD ITSKQVRKYP PRSMATIKGH LDQQRANLRS 
TKPSPVPLVA SPNPLHESPL DFCPAPTTPP AGRTHHVFAA HQRVTGQIYT DQPGRFLTPS 
SAGHTDMLVL YDYDSNAIHV ELMKSKSGAE ILAAYQRAHS LFTHHGLQPQ LQRLDNEAST 
ALQSFMTAHQ VDFQLAPPHL HRRNAAERAI RTFKNHFIAG LCSTNPDFPL HLWDRLIPHA 
LLSLNLLRGS RINPTLSAHA QLHGAFDYNR TPLAPPGTRV LVHEKPAVRE TWAPHAVEGW 
YLGPAMNHYR CHRVWITETR AERVADTLAW FPSKIPMPTA SSTDRALAAA RDLVCALRNP 
APASPFTPLD ANQHQALTQL AELFESVAVP ASPIAAPARA PPVPAPVPAL TPAQVRFAVP 
IVTAEHAPAL PRVPTLAPPP PRVPPTATYH SRTRNPGRRR RKARKPPPTP TLVPAHPHNT 
RTRPFLAPPP PTQSSTPQPA PL