Gene PHATRDRAFT_37556 details

Gene Information

• Locus tag: PHATRDRAFT_37556
• ID: 7202416
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: -
• Start bp: 400149
• End bp: 402348
• Gene Length: 2200 bp
• Protein Length: 703 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002181720
• Protein GI: 219122786

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.388143
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCCTT GGGAGCATTC TCCGCGACAG AAACCTTCCG CTCACTCTTT CTCCCACACC 
CACGGTACTT GCACTGCGAG TGCTCGCATG GCTACCGCTT CCATCCTCAC GCGATCCACC 
AGTCCACCCG TCGTGGCTAC TTCTACGCCC GACGAACTCG ACGACGAAGA CCGACCATGC 
CGTGCGTGTC GTCGCACCGG TACGTTACGG ACTGACTGGC AGCAGGGTGA TCGGGTTTGC 
ACCCAATGCG GCGTCGTCGA CCAGGGTCAC GTCATCGACA CGCGTCCGGA ATGGCGAGAG 
TTCCACGACG ACGCCGATCT CGCCAAAGGC CGTCCTTCGC AAGCGCGCTC GGGTTTGACG 
GTGGTGGACG AATCGCGGTA CCTTGGGGGA CTCCAACCCA CCATGCTCTC CACGAACGTC 
TACGGCACGG CCTCGTCCAC GTCGCAGCAA ACACGGAAAC GCCTCTTGGT GGCCGCGCAC 
AAAATGGACC GACTCATGGA ACGATCGCAC GCGCGCGCGT TGGAGGCGGT CCGTGTCTCG 
CGCGCGGCGA ACCGGAAACG TCGACGAGTG GAAGGACACC CGGTACCGGG AGCGGTGGAT 
CCGGACGAAG ACGACGCGGA TATCGACGCC ACGATGCGAC CAGAATACGA AGATTTCGTA 
CAGTTGGAAG AGCAGGAAGC TCAACGGTTG CAAATTGCGT CGTACGGCGA CAAATGGAGC 
CTGGAACGGG CCATCCGGTT GTACGGATCC GCCTTGGAGC AACAGAACTT GTCGACCGAC 
GACACAATAG ATGACCGGGG CCATCTGGAT GACGGATTAA AACGTGCGTC TCGAGATCTC 
TATCAAGCGT ACACATTTCT GTCCACAGCG GTGCAAACGC TGGAGCTCAC GGATCGGGTG 
CAGCATGAAG TGGTCGGACT GCTGGTTCGG TACGCAAAGT GTCGCGACGG CCTCCAAGTT 
CGAGGTGTGT CCTCCACGCT ACAAAAGCGC CCCTCCACCA AAGCTACCTC TCCCAACGAG 
ACGCAGCGGG CGCGTCGGAG TTTACGCGAA TACAATCAGG CCAAGCAAAC CGGTGCGCTT 
CTGGCCGCGC TCCTCTTTTA TACCGCCCGC AACCTCGGCT GGCCCCGCAC CCTCGTCCAA 
GTCTGTCACG CGATTCCTTT TCCATCCCAG TCCTTGCCTC ATTTGGATCT CAGATGCGAG 
GACGGGGAGT TTATTAAGCG AAAACACTGT TCCAAAGCCA TGACGGAAGT AAAACAGGTT 
TTCCCAGATA TTTGCCGGGT GACGGCCACG TTGCATGCGG TATCGAACGT TTCGTCTGCC 
AGTAGCAGCA GTACCAATAG CAACAGTAAC AACTACAACA AGAGGAGCGA AATTCCGCAA 
CCACAGAGAC TTCAAGACCA TGTTTCGGTA ATCAATTTTG TCGATCACGC CATTCGCAAA 
TTACGTCTAC CACCTGTTGC CGAAGCATGC GTGCGGATCT TGGTATTGCG GTATTGCCAC 
GGAACAAAAG ACTCTGCTTT GCGATTAGGT GCCATAACGG CTTCCTCAGT GTATTTTGTT 
ACACAGACGG GAGACATTAT GCAGCGATTG GCCAAGCAGG CTGTGAGCGG TAGCAAACCG 
TCCTTGGCAT CGAAGCACGA CAAAGTGACG AGAACGAATT CCTCGCCTAC AGGTTTCCAC 
AGGACAAAGT TGGAACTCGA CGGTTTCACT GCCGCACGAG ATCCGTCGGC TTCCGCAAAC 
GTCAAGCATG AAGATTTGTT CAGCGCGGAA GCAGTGCAGG AATTTGCCTC GGAGCAAAAG 
GTGTACGAAA TGCGACGGGT GTGGGACGCT TGGTCGGAAC AAACAACCTG GATGCGCAGC 
TTGGGTGAGA TTGAACGAGC AATGGGAGTT TCGAGACCAA CGCTTGTGGA AGTCTTCAAG 
AAAGAGATTT TTCCGAAGCG AGTTGAGCTC TTGCAGGCTC TTCAAGATTC TGTCGAGACG 
AGTGATACAG AGCAGAAGAC TGTTTTGTCC GAGACACCAT TGGCCTCGGT GTTAGTTCCA 
CACATTGCTG CTGCGGCGCC CTTGCTCAAA GCTTCTAAAT TGTAAAAGTA TGTAATGTAA 
ACTTTTGTTA CAATCGAGCG GGATCAGTTA CTACATTGAA AAGCAAGAGA AAACAGCGCA 
GAGGTGGATG GATGTCTCTG TTACTGTCAG CGCTTCTTAA 

 

Protein sequence

MSPWEHSPRQ KPSAHSFSHT HGTCTASARM ATASILTRST SPPVVATSTP DELDDEDRPC 
RACRRTGTLR TDWQQGDRVC TQCGVVDQGH VIDTRPEWRE FHDDADLAKG RPSQARSGLT 
VVDESRYLGG LQPTMLSTNV YGTASSTSQQ TRKRLLVAAH KMDRLMERSH ARALEAVRVS 
RAANRKRRRV EGHPVPGAVD PDEDDADIDA TMRPEYEDFV QLEEQEAQRL QIASYGDKWS 
LERAIRLYGS ALEQQNLSTD DTIDDRGHLD DGLKRASRDL YQAYTFLSTA VQTLELTDRV 
QHEVVGLLVR YAKCRDGLQV RGVSSTLQKR PSTKATSPNE TQRARRSLRE YNQAKQTGAL 
LAALLFYTAR NLGWPRTLVQ VCHAIPFPSQ SLPHLDLRCE DGEFIKRKHC SKAMTEVKQV 
FPDICRVTAT LHAVSNVSSA SSSSTNSNSN NYNKRSEIPQ PQRLQDHVSV INFVDHAIRK 
LRLPPVAEAC VRILVLRYCH GTKDSALRLG AITASSVYFV TQTGDIMQRL AKQAVSGSKP 
SLASKHDKVT RTNSSPTGFH RTKLELDGFT AARDPSASAN VKHEDLFSAE AVQEFASEQK 
VYEMRRVWDA WSEQTTWMRS LGEIERAMGV SRPTLVEVFK KEIFPKRVEL LQALQDSVET 
SDTEQKTVLS ETPLASVGIS YYIEKQEKTA QRWMDVSVTV SAS