Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37520 |
Symbol | |
ID | 7202500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 334235 |
End bp | 335233 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181705 |
Protein GI | 219122755 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTCA GGGCGAAGCT GGCGCCAGAA CAAGCATCAC TATTGTACCA ATTGATCGGT CCTATTTCGC GCATTGCCTC GTCGTCCTCC AATGATCAGT TGCATACGGC GTCCGCGTCT TCTTGGATGA AAAATAGTTG CATGTTGTAT CTGGATGAAA TGGTGATGAG GCTTTCTGCT AAAGGCAAGA TGACCGATAC GGACGGTATT GCATGTTTTG CCGAGCTACA GGCTGGTGGT GGAATATTTT TCGAACATCG GATCGAAAGT AATGCTACAA ACAACGCCAT TGTCATGGAA CTTGACTTGG TTCAAATGCG TACCGCCTTG CAATCTATCC AACAAGACCG GAGCTCTCTT TTTCAAGCCG ACACGCTTTT ATCACACGAG GTCTCGTTGG AGCATCAGTA CACAGTTCTG AAGCTGGCCA AACGTAACAA TATTCCATGT CTTTGTCTGG ATGCATACAC AAGCTCAGCT TCAAATGGAG GAATGGTTAA AGTTCACCAT GCAATTCCTG TTCGTGTCTG TCGAGTAGCG GAAATGCAAT ACCATTTTCC ACCCCAGGTT TCATTACCGG ATGTCCAGCT TGAATTAATG CACGAAAATG GGAACAAACA ACCGCTTCGT ACCATCGTGG AACGGCTACG TCCTATCGCA TCCACTGTCC TACTGAAAGG CAACATGAAA ACTGGAGATC TGACTTTAAG CGTTGACACG GATGGTGCCT CAATACGAAC CTTCTTTCAT CGACTTATAC CTCGCCCTGA CGCCTGTAAA GAAAACACGA CAAACATTTG CGAAGTCAAA ATTGAAACCA AGAAGCTCAC TTCCTGTTTA CAGTGGCAGC AAAATACCAA CTTAGCATCA TCGGCACTAT TGTGTCTCGT TGAGAACGAA GTAGTAGTCT TGCATGTTAC ATTGAGTCCT CGATCTGTGG GTTTCTTTAC ATACTATGTC CCGGTACATT TCTTGTCCAG TGATCCATGT GAGGATTGA
|
Protein sequence | MKFRAKLAPE QASLLYQLIG PISRIASSSS NDQLHTASAS SWMKNSCMLY LDEMVMRLSA KGKMTDTDGI ACFAELQAGG GIFFEHRIES NATNNAIVME LDLVQMRTAL QSIQQDRSSL FQADTLLSHE VSLEHQYTVL KLAKRNNIPC LCLDAYTSSA SNGGMVKVHH AIPVRVCRVA EMQYHFPPQV SLPDVQLELM HENGNKQPLR TIVERLRPIA STVLLKGNMK TGDLTLSVDT DGASIRTFFH RLIPRPDACK ENTTNICEVK IETKKLTSCL QWQQNTNLAS SALLCLVENE VVVLHVTLSP RSVGFFTYYV PVHFLSSDPC ED
|
| |