| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_28797 |
|---|
| Symbol | PTD9 |
|---|
| ID | 7202268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 741641 |
|---|
| End bp | 743063 |
|---|
| Gene Length | 1423 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | desaturase delta 9 desaturase |
|---|
| Protein accession | XP_002181794 |
|---|
| Protein GI | 219122941 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTAAGAAATA CGTACCCCAA GGAATAAGCG ATCGACTGCC ACCTAATTGC CCACAACCTC
CTTGGATCAT CATCATCATC CTCCACATAC CACTGTCTTC GCATAAACAG AACTCCCAGT
CCAGACAGTC AGTCACCCTG CAGAACACAA CACAAACTTG TGATCCCGTG TGCTCATAAA
TCTTCAGAGC CCTCCTCGAC ACACTCTCCA ATAATTCCAA CACGAACCAT GGACTTGTCT
TCCGAAATGC TCCGTGAAAT TCCCGGGACA TTGTCCCAAC ACTACAAGGC GGGCAACCTG
AACTATCCCA TGATTGTTTA TACTACGATC GTACACACAG TAGCTCTTGT TGGGCTCTGT
ACGATCCCAC AAGCTTCCGC TGAAACGTTG CTCTGGGCCT TTGTCCTTTG GCCGATCAGG
TACGTTCTTG TCAGTGTACA CGCATGGTGA CTCGACCAAA TAGTCAAGCC TTGGAAGATT
CCACTCTAAC GTATCCTTGT TTTGGTTTTC ACAGTGGTTT TGGTATCACC GTAGGAGTGC
ATCGACTTTG GTCGCACCGT TCATACGAAG CCGCATTGCC AGTCCGTTTT GTCCTTATGC
TGTGCAACTC CATTGCTAAT CAAGGATCCA TCTACCACTG GTCACGGGAT CACCGCGTGC
ACCACAAGTT CTCCGAAACA GATGCCGACC CGCACAATGC CCGACGAGGT TTCTTCTTTG
CGCACATGGG TTGGTTGTTT GTCAAGAAGG ACCCCGCCGT CATTGAAGCC GGCCGGGAAA
TGGACTTTTC CGATCTCCTG GAAGACCCCG TGGTCGCCCT ACAGAAAATG GTCGATCCTT
GGTTCGCCTT GTACATGTGC TATGTCATGC CGGCACAAGT CGCTTCCTAC TTTTGGGGCG
AGAACTTTTG GACCGCCTTC CTCGTTGCCG GTGGACTCCG GTACTGTTTC GTCCTCCACT
GCACCTGGCT CGTCAACTCG GCCGCACACT TGTACGGAGA TCACCCCTAC GATCTTACCT
CCTACCCGGC CGAAAACCCT TTCGTGAGCT GGTGTGCCGT CGGAGAAGGA TGGCACAACT
GGCATCACAA GTATCCCTTT GATTACGCCG CCTCTGAATT TGGAGTTTCG TCCCAGTACA
ATCCGTCCAA ACTCGTCATT GATGTTCTGG CATCGGTTGG TTTGGTGTGG GGACGAAAGC
GTGGTACTGC CGCCTGGGCT ATGGGACGCG CGCGGAGAGA TCGGGACATT GCGCAAGGCA
AGGAAATGCC GAAACAACCC CCGCGACCGT GGGAAGTTCG TACCGTCGCA CGCAAGATTG
CGTAATGCAC ACCGCGGTAG ATTGCCAACT TTCCTTTTTT TTCCCAAACC TCCTTGCCTA
CTTGTATACA CACTTTAACC ATAATAATTG GTTGAAAGAG TCT
|
|---|
| Protein sequence | MDLSSEMLRE IPGTLSQHYK AGNLNYPMIV YTTIVHTVAL VGLCTIPQAS AETLLWAFVL
WPISGFGITV GVHRLWSHRS YEAALPVRFV LMLCNSIANQ GSIYHWSRDH RVHHKFSETD
ADPHNARRGF FFAHMGWLFV KKDPAVIEAG REMDFSDLLE DPVVALQKMV DPWFALYMCY
VMPAQVASYF WGENFWTAFL VAGGLRYCFV LHCTWLVNSA AHLYGDHPYD LTSYPAENPF
VSWCAVGEGW HNWHHKYPFD YAASEFGVSS QYNPSKLVID VLASVGLVWG RKRGTAAWAM
GRARRDRDIA QGKEMPKQPP RPWEVRTVAR KIA
|
|---|
| |