| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_28689 |
|---|
| Symbol | |
|---|
| ID | 7202429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | + |
|---|
| Start bp | 473036 |
|---|
| End bp | 474758 |
|---|
| Gene Length | 1723 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181564 |
|---|
| Protein GI | 219122463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGTTCCAAA GTCACAAATG AAGCCTTTGA TGACTTGGAT CTTATCGACG AGCTAATTGG
CGATGTCGAC AGTGCCAACA TACTGACCAG ACTAGACGAA AATGACAACA AGCGCGCTGC
CGAAGACGAA GAATTTAATC AGAAAGCATT GCCCCAATCC GAAGTCGAGG TGGCATTGCG
TATGGTTAAA CAACCAATAG ATCAAGCCGC CACCGCCTGG AAAATAGCCC CCTTCCTGAC
AAACAACCTA AAGCGGGACG GATTTGCAAA CTTCTTTCCT ATTCAAGCAT TGGCGATTCC
AGATGTAATT GCGAGTGAGC GTCATGCATA TATTCAAGCA CGAGACGTTT GCATCACGGC
ACCGACTGGT TCAGGGAAGA CGTTGGCTTA TGTGCTACCC GTTCTCAATT CATTGGCTAA
TCGCAAAATT CGCAGATTGC GCGCCCTAGT TGTGCTGCCG AGTCGCGACC TCGCCAATCA
AGTCTTCAAA GTCTTTAAGT CGTTTATGGA AGGCTCCGAT CTCAAGGTCG GCCTCGCGAT
TGGTCAGTCC GACTTTGTGG CAGAACAGAT GGCGATGTCC GTAGATCCCG ACATCAATTC
ACAGGATTCG GATTCGGCTC GACGGCGGCT GGCCTTTGAT ACAGGGAACG TCAGTTTGGC
TTTGCAGGCG TTTGAAGATG GCAACGACCA CGACTTACCG GAAAAAAGAG ATCCGCAAAG
CACAATTGAT GTCCTGGTAT GCACACCAGG ACGCTTAGTG GATCACTTGG ACAATACACC
CGGCTTCTCT TTGGAGCATT TGCGTTTTCT CATCGTAGAT GAGGCAGATC GTCTACTCAG
TCAAACTTAT CATAATTGGA TTGGGCGGGT GATACAGAGC GCAAATTCGG GGTCGGTTGC
CGCATGGAAA CGAATTCTTG CGAATGATAA CGAGCTTCCG ATGCCACAAG TATCGAAAGA
CGGAGCGTCC TACTGTATCA CGCCTACAAC CTGGAGGCGC GGTGGAGTTG TCGGAGACGA
TACCGACTTT AACACGAACG ATTCGTACCG TAGCGTCGCT TCTTCCGTTT GCCGACCGGT
TCAGTTGCGC AAGTTTCTGG TTTCGGCTAC GCTGACTCGT GATCCGCAAA AATTGGCCTC
CCTCAAGCTT GTGAATCCCA AGCACTTTGA CGTCCATCAG CTCAGAACCG GCCATCAGGG
GTTCTTCAAC ACCAACACAA AGAAGTATTC AATGCCGGAG GGCCTTCACG AACACACAGT
CGAGTGCACC GCGGAGCAAA AGCCTATCGT TCTTTTAGCG CTTGTGCTGG ATCAGCTTAC
GCCCCAGCAA TCGCAATCCA GTAGCAAGCA GAGCGTGATA GTGTTTACGG CCAGTCTTGA
TTCAACCCAT CGTTTAGCTA GGCTCTTACA GCTACTCTGG GTTTCGGCCG GCTACGGCGA
GCCCGATTCA GTTGTGGAAT TCTCTAGCGC CCTCAACCAG CACGAACGAT CGGCGCTCAT
GAAGCGCTGT AACGACCCCC AGGACAAAGT CTCCGTCGTA GTATGTTCGG ATGGCATGTC
CCGCGGTATG GACATTGACG CGGTCCGAGC CGTGATCAAC TACGACGTAC CAGGTTTGGC
CAAAACCTAT GTTCACCGCT GCGGACGGAC AGCTCGCGCC GGCAAGGAAG GACACGCAAT
CAGCTTACTG AAGGGCGGAC AAACGCGACA GTTTGACAAA ATG
|
|---|
| Protein sequence | MVKQPIDQAA TAWKIAPFLT NNLKRDGFAN FFPIQALAIP DVIASERHAY IQARDVCITA
PTGSGKTLAY VLPVLNSLAN RKIRRLRALV VLPSRDLANQ VFKVFKSFME GSDLKVGLAI
GQSDFVAEQM AILALQAFED GNDHDLPEKR DPQSTIDVLV CTPGRLVDHL DNTPGFSLEH
LRFLIVDEAD RLLSQTYHNW IGRVIQSANS GRGGVVGDDT DFNTNDSYRS VASSVCRPVQ
LRKFLVSATL TRDPQKLASL KLVNPKHFDV HQLRTGHQGF FNTNTKKYSM PEGLHEHTVE
CTAEQKPIVL LALVLDQLTP QQSQSSSKQS VIVFTASLDS THRLARLLQL LWVSAGYGEP
DSVVEFSSAL NQHERSALMK RCNDPQDKVS VVVCSDGMSR GMDIDAVRAV INYDVPGLAK
TYVHRCGRTA RAGKEGHAIS LLKGGQTRQF DKM
|
|---|
| |