Gene PHATRDRAFT_21682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21682 
Symbol 
ID7202594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp759950 
End bp761493 
Gene Length1544 bp 
Protein Length416 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181799 
Protein GI219122951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.848598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAATTCGGT CGGAACGCAT GCAAACGAAA CCTTTGCAGC CTGGCAGCAA GATTTGTGGC 
AACAGCTCGT TCCGAAAGTC AAACAAAGTA CGGCGGCAAC CTCGTCGTGT GCGTGTGCGA
GTGAAGGAAA GACTGCCGAG AATGCCGGTG GTTGCTGTTC CTCCTCCAAC AAGGACCTTG
ATGCCAACGA AGAAGCCAAT GCAGGATGCT GTTCCAGTCC AAATAACGAT GATGATGACG
ACAACGAATC ATACTATTCG GAAGAAGAAG ATGACGAAAA CGAGGAACCT GCTGTGATGG
ATTTGGAAGA CATGGGCGAT GCCATGCTGG CGACACAAGC TGCCACCGTC AAATCTAAGG
AGCCACGCGA AATGGTCACG CCGAGCCAAG CAGCAGCTCT TAAAAAAGAA GGATACAAGT
TGATCGGAAC CCACAGTGCC GTCAAACTCT GTCGCTGGAC GAAACACCAG TTGCGAGGAC
GTGGCGGATG TTACAAGCAC ACCTTTTACG GCATCACCAG CTATCAATGC ATGGAAGCAA
CACCAAGCTT GGCCTGCGCC AACAAGTGCG TCTTTTGCTG GCGCCATCAC AAAAACCCAG
TGGGCAAAGA GTGGCGATGG AAGACGGACG ATCCGTATTT CATTGTCGAT CAGGCTGTCA
ACACACACGT ACAAATGATC AAGGAAGCCA AAGGTATTCC GGGTGTGCGT ATGGATCGTT
GGCAGGAAGC TCATACCGTT CGTCATTGTG CACTTAGTTT AGTTGGTGAG CCTATTATGT
ACCCGCGCAT CGGTGAACTC TTGGGAGATC TCCACCGACG CAAGATTTCG ACCTTTCTGG
TGACTAACGG TCAGCACCCG CACGCCATCG GGACACTTCG TCCCATTACA CAGCTTTACG
TTAGTGTGGA CGCACCTACG CAAGAAAGTT TAATAGAAAT TGATCGCCCA TTGTTCAATG
ACGCTTGGGA TCGTTTGAAA CAATCGCTCG TTTCTCTAAA GGACAAGGGT CAACGAACGG
TGGCTCGTCT GACAGTTGTC AAGGGCTGGA ACTCGGATGA AATCGAAGGT TACGCTAAGC
TGATTGTCCT AGGACAAGTC AGCTTGGTGG AGGTAAAGGG GGTGACGTTC TGCGGCAAAT
CCGACGCTTC CAATCTCAAC ATGACCAATT CCCCGTGGCA CCATGAGGTA GTTGAATTGA
CTAGAACGCT GAAAGACGAA ATTCAGAAGA TTCGCGACAA GGGTGGTGAC GACGTACCTC
CTGAATACGG ATTGGCATGT GAGCACAAAC ATTCGTGCAG CGTTCTACTG GCGCGAGTAG
ATCAGTTCTC TAAGGTGGAC CCCGCCACTG GGCAGCGCAA GTGGCAAACT TGGATTGATT
ACGACCGTTT CCAAGAGCTG GCGGCAATGT ACGAAGAAGA TCCTACGTTT ACGTTTGGAG
TCGAAGATTA CGTGGCGGAT ACGCCCGCAT GGGCTCTTTT TGGCGCTGAA GAGGAAGGCT
TTGATCCAAC CGACAAACGT CACCGGCGTC CGAAGAAACA TCCC
 
Protein sequence
MDLEDMGDAM LATQAATVKS KEPREMVTPS QAAALKKEGY KLIGTHSAVK LCRWTKHQLR 
GRGGCYKHTF YGITSYQCME ATPSLACANK CVFCWRHHKN PVGKEWRWKT DDPYFIVDQA
VNTHVQMIKE AKGIPGVRMD RWQEAHTVRH CALSLVGEPI MYPRIGELLG DLHRRKISTF
LVTNGQHPHA IGTLRPITQL YVSVDAPTQE SLIEIDRPLF NDAWDRLKQS LVSLKDKGQR
TVARLTVVKG WNSDEIEGYA KLIVLGQVSL VEVKGVTFCG KSDASNLNMT NSPWHHEVVE
LTRTLKDEIQ KIRDKGGDDV PPEYGLACEH KHSCSVLLAR VDQFSKVDPA TGQRKWQTWI
DYDRFQELAA MYEEDPTFTF GVEDYVADTP AWALFGAEEE GFDPTDKRHR RPKKHP