| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_21667 |
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| Symbol | |
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| ID | 7202588 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 733423 |
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| End bp | 736847 |
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| Gene Length | 3425 bp |
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| Protein Length | 976 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181619 |
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| Protein GI | 219122578 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0681414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAGAA ATACTTTGCG ACCATGGCGA CCCAGCAGCT TCAACAAATT ATTTCCGAGA
CGCTGTCTCC TTACGCGGAA ACGCGAAAGA CTGGTACGAT TTGAGGGTGT CGAAAAGATC
GACGTAGTTG GTGTCGCGAA AGAATTAACC GACGGACCGG ACCGGGCCGT CACTGCTCAC
AAGCACTGTT TGGTTCCTTT TTCTCACCTC TTCTTTTGTC TCCCTGCACC AGCCGAAGAT
CATCTGAAAG CTGCCAAATC TAGTCCTAGT CATCCGCTGC AAGTCCTGGA AATTGTCGCC
AAGGCGGACG GTAACGACGC GGCGGTGCGG CAAGCGGCTG CGGTGCACTT TAAAAATGTT
GTCAAAAAGG GCTGGGACGT TCAACGGGAG GAGGGTAACG AGGGGATCGT CATCAACGAT
CAAGACCGTA TCACCATCAA GTCACATTTG GTTCAACTCA TGTGTACAAC GCCGCCACAG
ATTCAAGTAC AGCTCAGCGA AGCCATCTCC TTGATTGCGG CCGTCGACTA CCCAAAAGCC
TGGGACAATC TACTGCCCGA ACTCGTAAAG CAATTTCAGT CTCCCGATCA GACGGTGGTT
AACGGTGTAC TGAAAACTGC CAACGGAATT TTCAAGTCGT TCCGATTCGT CCAACGATCC
GACGATTTGT ACGGGATTAT CCTTTACTCT CTCAATATTG TGCAAGGACC ACTTTTGGCT
CTTTTCAAGT CCACCGGCCA AAAGGTGGAC GCCGTCGCCA ACAATACGGC TCAGCTCAAA
CCACTCATGC AGTCGCTACG CCTCATGTGT CGCATTTTTT ACTCGCTCAA CTACCAGGAC
TTGCCTGAAT TCTTTGAAGA TCACATGACG GACTGGATGT CCGAATTTGC CAAGTACCTC
ACGTACCAAA ATCCGGCCTT GGTGGATACC GACGAAGAAC TCGAACCCAG TCCGATTGAT
ACTTTGCAAG CGGCTATTAT TGAAAATTTG GCCCTTTACG CGGACAAGGA TGAAGAGCCA
TTTATGGAAT ACCTACCCAA CTTTACTCGA CTCGTTTGGA ACCTGCTCAT GACGATCAGT
GCCTTCCCGA AACACGACAG TCTCGCTACC ACCAGCATTC GTTTCCTGTC CAGTCTCGTC
CAAAAACGAA TGCACCACCA CCTTTTTCAG GAAGAAGCCA CCCTCCGCGA AATTGTTTTA
AAAATCGTCA TTCCCAATTT GCTTTTTCGC GAGTCCGACG AAGAACGATT CGAAGACGAT
CCGAGGGAAT TCATTGTCAC CGAAGTCGAA GGTTCTGACA GTGAATCTCG CCGTCGATGC
AGTCAAGACT TGCTCAGGGC CATGTGTCGC CAGTTCGAAA CGCAAACCAC CACAATCTGC
TCCGAACACG TTGCCAGTAT GCTGCTCGAG TTCACCAATA ACCCTAATGG TAAATGGGCA
TCCAAAGATG CCGCGGTACG TACCCATTAT TGGGTTCATG TGCGAACGTA CGTAATTTGA
TCCGCATTGG CTTACCCTTG CGCACTCATT TTTTGTCCTT GCACAGATTC ATCTCATGAT
GGGCATTGCC ATTCGACGAG AGAGTTCATT GGGGGTTTCT GAGCTCAACG ATGCGGTCAA
CTTGATGGAC TTTTTCCAAT CGCAAATCTT GCCAGAACTA CAGGATCCGA ACCATTCGAA
TCGACCAGTG GTCAAAGCGA CTGCAATCAA GTTCGTCAGT GTATTTCGCC AACAGTTTAC
GAGGGAGCAC TTGACTCAGA TCATGCCCAT GCTGATTGCG CAACTCGGCT CACCAGCGGT
TGTAGTCCAC ACCTTTGCCG CGTATGCGAT TGAACGCATT TTGTATACGA AAGAGACCAT
CAACGGAAAA AAGCATCCCA AGTTTGGCGC GGCCGATCTC CAACCCTTTT TGGAACCCCT
CTTCAATGGA CTGTTTGCGA TTGTAGACAA CGTGGAGCAC AACGAAAATG ACTACGTCAT
GAAGTGCATC ATGCGATCTT TGGCGACGCA AGGCGAGGGT ATCATTCCCG TGACACAGAT
TGTTCTCACC AAACTGACTG CGGCATTGGG TCGCGTCGCC AAGAATCCTC GCAACCCACA
GTTCAACCAC TTCTTGTTTG AGTCCATTGC CGTCTTGGTT CAATCGGTTT GCTCCGTAGA
CCGCAATGCC ACTGCACTAT TCGAACCGCT TTTGTTCGAA CCATTCAATA TTGTGTTGCA
AATGGATATT GCGGAATTTA CACCTTATGT CTTCCAAATC TTGGCGCAGC TACTAGAGTA
TCGCCCGACT GGCTCGGGTT TGGGGACGGC CTACCAAGCA CTCTTTTCCC CGTTGCTGAC
CCCGGGTCTT TGGGACAAGC GTGGAAATGT TCCAGCGTTG TCACGTTTGA TGCAAGCCTA
CATTCGTAAG GCGGCACCGG AACTGGTGGG ACAACTTAAC CAGATACTGG GTGTTTTCCA
AAAGCTGCTT TCATCGAGAG CTACAGAGGC CAATGCGTTT GACTTGCTGT CGTCAGCAAT
TCTTCACTTT CCACAAGAAG AAATGGAAAC GCGCATTGCT ACAATTTTTC AGCTTGTGTT
GACACGGTTG CAAGCGGGCA AAACGCCCAA ATATGTCCGG CTTTGCACGC ATTTCTTTGC
CCTCTTCATT GGCAAGTATA GCGCGAATGT GTTTATGGAT CGTATGAACG CAATCCAGAA
TGGCTTGTCA TTGAATTTGT TGGAGCATGT ATGGATCCCA CGCGTGACGA CGGATCCCCC
GGTCCAGCGT ACGGAAGCCA AAGTGCAGGT TGTTGGGCTC ACCAAGCTGC TTTGTGAATA
CCCCACCCTG TTGAACGATG CCCATGGGCA AGCCATTTGG TCAAAAGCAG TCGTTGCCAC
AATCACTATC CTTACATCAT CATCATTTAA AGCCACGGAA GAAACAGGTT TAGATGAGGA
AGAGATCGAA ATCGGGTATG ATGCCCAATT TTCACAGCTC AAATTTGCGA GAAAGGCCGC
AGAAGATCCC TTCCCAGAAG TTGCGGACCC TACACTTGGT TTTGCCCAGG CTCTTCATCA
AGTTTCGAGT GCACATCCGG GACGTATATT GCCCTTAATC CAGCAGGGGC TGAACGGGGC
GGACCCAAAG TTGTCGGTTG GTCTGGAATC CATGCTACAA GCCGCCAACG TGCAACTATC
GTAAAATCTC ATGTGTGTAT CGGATACGAC TCCATGAATG CTTCGACTTT TATTTGATAA
AGCTCTCCAC TTTAGAACAC ACACATAGTT GTGCTTCTAT AATTTCTGAA TAGGCAAGCT
GACCGAGAGA TCAACATCCT TTTTACGTCA TCCAAGGCCA AAATGGGCTG CTCATGACTG
TGGCTTACAA AACAAGTAAC GGATTTGAAA AGCCGGTCTA AAGAAGTATG TTTATAAATG
TTTTA
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| Protein sequence | MATQQLQQII SETLSPYAET RKTAEDHLKA AKSSPSHPLQ VLEIVAKADG NDAAVRQAAA
VHFKNVVKKG WDVQREEGNE GIVINDQDRI TIKSHLVQLM CTTPPQIQVQ LSEAISLIAA
VDYPKAWDNL LPELVKQFQS PDQTVVNGVL KTANGIFKSF RFVQRSDDLY GIILYSLNIV
QGPLLALFKS TGQKVDAVAN NTAQLKPLMQ SLRLMCRIFY SLNYQDLPEF FEDHMTDWMS
EFAKYLTYQN PALVDTDEEL EPSPIDTLQA AIIENLALYA DKDEEPFMEY LPNFTRLVWN
LLMTISAFPK HDSLATTSIR FLSSLVQKRM HHHLFQEEAT LREIVLKIVI PNLLFRESDE
ERFEDDPREF IVTEVEGSDS ESRRRCSQDL LRAMCRQFET QTTTICSEHV ASMLLEFTNN
PNGKWASKDA AIHLMMGIAI RRESSLGVSE LNDAVNLMDF FQSQILPELQ DPNHSNRPVV
KATAIKFVSV FRQQFTREHL TQIMPMLIAQ LGSPAVVVHT FAAYAIERIL YTKETINGKK
HPKFGAADLQ PFLEPLFNGL FAIVDNVEHN ENDYVMKCIM RSLATQGEGI IPVTQIVLTK
LTAALGRVAK NPRNPQFNHF LFESIAVLVQ SVCSVDRNAT ALFEPLLFEP FNIVLQMDIA
EFTPYVFQIL AQLLEYRPTG SGLGTAYQAL FSPLLTPGLW DKRGNVPALS RLMQAYIRKA
APELVGQLNQ ILGVFQKLLS SRATEANAFD LLSSAILHFP QEEMETRIAT IFQLVLTRLQ
AGKTPKYVRL CTHFFALFIG KYSANVFMDR MNAIQNGLSL NLLEHVWIPR VTTDPPVQRT
EAKVQVVGLT KLLCEYPTLL NDAHGQAIWS KAVVATITIL TSSSFKATEE TGLDEEEIEI
GYDAQFSQLK FARKAAEDPF PEVADPTLGF AQALHQVSSA HPGRILPLIQ QGLNGADPKL
SVGLESMLQA ANVQLS
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