| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_21557 |
|---|
| Symbol | |
|---|
| ID | 7202423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 448509 |
|---|
| End bp | 449795 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181728 |
|---|
| Protein GI | 219122803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTCTATCTGC AATCCAACAT GGCCAAAAAG AAAGATAGTT TCAAACGCCG TCGAATTAGC
GGTGATCTTG TCGAAAAGGC TGGAAGCCTG GATGCAGGGC CTCAACAAAA AGTCGACGAA
AAGGTTGTCA CGGAGGATAG TTCTTCAAGG AGAAAAGCTG AACTTCTCCA AGCCGAAAGT
GAAGTACATA GCGACGGTGA GGATATCGAC GATACTACCG TGCGGAATGA TGGTCGGTAT
CGAAACAAGC AGCGTTGTTT GACCCTTTGC TCTCGGGGTG TCACGGCACG CTACCGCCAT
CTATTGGAAG ATCTGCGCAC GCTCATGCCG CACCACAAGA AGGAGTCCAA ACTTGATCCA
GGTGAGGACG GGGTTGGCCA GGCTGTCAGC GATATTTGCG AAATGCGTTC CTGCAACACG
ACTATGTTCT TGGAATGTCG CAAAAGACAG GATGCGTACA TGTGGCTGGG CCGCGTCGGT
GGTCAGTCGC CCGGCCCGAG TGTGCGTTTT CATGTCACAA ACATTCATAC GATGGATGAG
CTGCGTTTGA CGGGGAATTG TATGAAAGGA TCCCGGCCGA TTATGACGTT TGATGAGAGC
TTTGGGCGTG TGGATCACTT GAAGCTATTA AAGGAACTCT TCATTGACAC ATTTGGTACC
CCGCGGGGCC ATCCGAAGAG CAAGCCATTT GTTGATCGGG TGATGGCGTT TTGCTATGCG
GACAACAGGG TAAGTCCTTC TATTACACTC TACTGTCTGC TACGTCCGTA AAACAGAGAT
CATGCTAGTG ATTACAAAAA TGATGAGCGT ATGTCAGAGA TCACTGATCA ATGAGAATAC
CATCATTATA GACTACGATG GAATGAAGCA ATGTCGGGCA ATCAATCCTT AGCCGCTTCT
CTGTTGCAGC ATGGCACTCA CATCTGCATT CACTTTTGCT AAAACTTTTA GATCTGGGTG
CGGAATTATC AAGTTATTGA AGAACAGCCG TCAAACGCCA AGGAAGCTCA TCAAATTAAG
AAGAATTCAG GAAGAGAAGA GGCTACTTCC ATGGTGGAAA TTGGCCCGCG TTTTGTTTTG
AACCCGATCC GCATTTTTCG AGGATCGTTC GGAGGTCAAA CCTTGTTCCA GAATCCTGAT
TTTGTGTCAC CTAACGAGAT CCGTTCCTTG GAACGAAAGA GCAAAGGAAG TCAATATGAT
CAGCGGAAAA ACTCGCAGAA GGAGCGACAC GAGCGGAAAT CACAACTGGT TTTGCCGGAA
GACCCGTTGA AATCCGTTTT TCGGTGA
|
|---|
| Protein sequence | MAKKKDSFKR RRISGDLVEK AGSLDAGPQQ KVDEKVVTED SSSRRKAELL QAESEVHSDG
EDIDDTTVRN DGRYRNKQRC LTLCSRGVTA RYRHLLEDLR TLMPHHKKES KLDPGEDGVG
QAVSDICEMR SCNTTMFLEC RKRQDAYMWL GRVGGQSPGP SVRFHVTNIH TMDELRLTGN
CMKGSRPIMT FDESFGRVDH LKLLKELFID TFGTPRGHPK SKPFVDRVMA FCYADNRIWV
RNYQVIEEQP SNAKEAHQIK KNSGREEATS MVEIGPRFVL NPIRIFRGSF GGQTLFQNPD
FVSPNEIRSL ERKSKGSQYD QRKNSQKERH ERKSQLVLPE DPLKSVFR
|
|---|
| |