Gene PHATRDRAFT_51018 details

Gene Information

• Locus tag: PHATRDRAFT_51018
• ID: 7202210
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 8458
• End bp: 13746
• Gene Length: 5289 bp
• Protein Length: 397 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002181116
• Protein GI: 219121527

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.322976
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAAGTGTGGT GTATGGTATG CCGTCTCACG CCCCGTTTTA CATCGAGCAT CTGCTATATG 
CGCCTTCACA ACAATCTAGC AAACCAGAAA CCATGGCCGC CCGTCCTCTC GTCAGCGTCT 
TTTCTCTCTC CGGTGACAAG TCCGGAGATG TGAGTCTTCC TGCTGTAATG ACGGCTCCTC 
TGCGCCCGGA TATCGTTCAG TTTGTGCACA CCAACATGAA CAAGAACCAT CGTCAGGCGT 
ACGCTGTTAA CATTCGCGCC GGAAAGCAAG TTGTCGCGTC GTCTTGGGGT ACTGGACGTG 
CTGTCGCCCG TATTCCTCGT GTTGGTGGAG GTGGTACTTC CCGTTCTGGA CAGGGTGCCT 
TTGGTAACAT GTGCCGTGGT GGACGCATGT TCGACCCCAC CAAGACCTGG CGCAAGTGGA 
ATAAGAAGAT CAACATTTCG CAGAAGCGTT ATGCCGTTGC TTCTGCCCTA GCTGCCACCG 
CCGTCCCGGC TCTTGTGATG TCCCGTGGGC ATGTCGTCGA CAACGTTCCG GAAATTCCCC 
TCGTTGTGGA AAACGCCGTT GAGTCTGCCA AGAAGACCTC GGCCGCGAAA GACATCCTCT 
CCGCCATTGG TGCCTTGGAT GATGTCGAAA AAGCGGGAGA ATCGAAGCAA ATCCGTGCCG 
GTAAGGGTAA GATGCGTAAT CGTCGTTACA CCCTCCGCCG TGGACCTCTC GTTATCTACA 
AATCGAACGA TGGCGTGGAA CAGGCCTTCC GCAATCTTCC CGGCGTAGAG CTATGCTGTG 
TTGACCGACT GAACCTTTTG CAGCTAGCCC CGGGTGGTCA CATGGGACGA TTCTGCATCT 
GGTCTCAGGC TGCTTTGGAA GAGCTGGACA TTATTTACGG AGAAAATGGC AAGCGCATCC 
CCCAAGCAGC CATGACCAAC GCCGACTTGG CCCGTATCAT CAACTCCGAT GAAGTACAGA 
GTGTCGTCAA CCCCGCCAAA CCTGGACAGA AGGACAACGC TCCCAAGCAA AATGCTATTC 
GTAACGTTGA GGCGTTGGAG AAGCTCGATC CATTTGCCGC CGAAAAGCGC CGTGCCCAAG 
CTCGCAATGA CGAGGCTCGT GCTTCGAAGA AGGCCGAAAC TTTGGCGAAA AAGCGTGATA 
GCCGCACGGC TAAGAAAGCT TTCAAGGAGC AAGGAAAATC GTTCTATGCA AAGGTTTCCC 
AGCAAGGAAC AGTCTGTGAG AATGGCTTTG CTCTAGAGTA AAGACCAAGC AAACAATTAA 
AGATATGGCG CCATGGATTT TTGCGATCTG AATATACCAC CTAGCATTTG AGGAGTCGTT 
CCTTCGTCAT GAAAGCTGTC TTTCCCGTAG TATTAGCCTC AACCAACTAG GCCACCATGT 
AGTTCACAAT CAGTGAAATA ACAAGCGCGA ACCACATCAA TTCGAAAGAA CTAATGTGAG 
AGGTTACACT AGTCTATTTA TGGACTAGTC AAGCCGTTGT ATCCATCTCG TGACTGGATT 
CGAACATACG TCATTACATT GTTTGCCGCG ACTCTGACAC ATTTCGGAGA GGTTGGGACC 
CGATTGCCAT CGCAAGATCG ACATCGAACA AACTTCACTG CTAGGACGGT AAATTACTAT 
TCACTGTAAT AACATTGCGA CGTGATTCAG TATGGCCATA CGGACCCGGA TAACTTGTGA 
CGTAGTCATT GGGGTTATCC TTCGGTCATG CAACTAGTCT AAACCTTGGG CACATCGGAT 
GATGTGCTCA CTTATTTTAT TATAAAGCAC TTTGCAAGAT GTACTTCTAG TCCCCTTGTG 
TGCTTGGTTG ACCAACATGC AAATTGATTG TCTCCGTGGA TGCGGGACAA TGGTCAACGA 
ACTAATTCAA TATAGTCCGG ATATCGTGTT GACCAGAAAT GTACCTACAC GTGGATATCA 
AATCAGACGA CATTGAGAGG ATCTGCGATT TTACCTAAAT CTGTACATCC CACAGATCTG 
AAAATCCACT ATCGGATCGA GTCTCTACAA CTACTGCCAT GAAGTACGTC GCCACTGCTC 
TCTTCCTCTC CCAGGCTACT GCCTTCACCA TCGTTGGCGC TCCTCGTCTC CAGACACGCC 
TCGCTGCTGC TGAGTACGAA GCGATGGATG GTGAAGGAAA AATTAATCTC AAGGTCTGTA 
CTTGCAAAAA AATCAGCATG CTTTCAAAGT TCCTTCCTCG CCTAAGCTTT GTTTTTTACT 
TTCTAAAGAT TGATTTGGAC TCACCGAAGG TTGCGACGAT GGATGACATT GAAAAAGGCA 
AGAAAGTCTA TTGCCGCTGC TGGTTGTCAG GAACCTTTCC CCTTTGCGAC GGTACCCATC 
AGAAGCACAA CGATGCTACG GGCGACAATG TTGGCCCACT AATCGTATCC GTGAAGAAGG 
AATAGGCAGC CTCGTCGAAG GAAGCCCCGC TTTTTGAATA AAGGACCATT GACTGTAATT 
CAATCAAAAG CCTGTCTTGA TGCCAAAAAA AGAACATACC TAAATCCAAT TATTCACGAT 
ATCGCCCACA CATATAGCAT GATAATAGTT CTTTTGGAAG TATTCAGACA TCAAGCATGC 
TTTGGACGAC TTGCTCTTGT ACGCTTGCCG AGTGTTTTTT TAGTTCAACG GATCGAATGC 
GCTTGATAGA TTCCGTCTTC CACATTGGAA CTCCTTCGCT TTCTTTCAGC ATCGCGTTTT 
CCGATATAAA GGCCTGGGCA AGCGCTGTCG CCAGCAATTG GCGCAATTGG ATAGTCTCGT 
CTCCCGGTGA TTGTCTCGAA CTCAGCGCAC ACAGTCTTGC AAGACATTGC ATTAAGATGG 
CTACACCTGT CTTGTCAAAG GCCGACCGTC GGGCAAACTC AGCTAGACAT GATGTGCTCT 
TCTCCTGCAA TTCCAATACT TTCTTGGCTA CCTGAAGCAC AGACCAGTGT AGCGAATAAG 
GAAGTGCGCA GGAAAGATCA CCAGTGTCGA CCTTCTCGTC TCGCAGACAT GCGACAATGT 
GCTCTGCTGT CAAGACAAGG TCATTGGACA GCATGGCGTC AAACAGTAAC ACAACACACT 
TGAGTCCCTT TGCTTCTGGT ATTGCGATTA AATCGCTATC CAGCAAATCG ACTGCTTCAC 
GAGCACTAAC CGCTACCTTG GAATTCGCGG GTGAATCGCC TACCAAGATC GTAAGCAGTA 
ATCTGGCTGT TTCAAGGCAA ACAGATGTCA ACTTTCGATA ACAGGATCCT TGATGAACAA 
CAGGCAAAAG ACTGGCTTCC GATTCAATAC CGACTATTAG CCATTGCATA GCCTCCCGAA 
GGCAATCGTT CTCGATGTAG TGTCGATAGC GTGACAAGAT TATCGCAACG TAGGCGTCCA 
AACCAAGCAA ACTCTTTCGC TCAACAAATG GACGGCAAAG GGATAGAAGC TCCCGCGCCT 
CAGCATCAGT GGTAACCAGA AGGTGCTCAA AAATAGAGGC AATGCTTGCG ACTGTCTCAG 
GGCAGCCAGC GTCGAGAGCT ACCGGTGAAA GCAAGCGAGT TGCTAAACGT GCGCCAGCGT 
CGGAATTGTT ATCTTGAAGA GAAGAAATAA TCGCTGAAGC TGCCTCGCAA ATGAACTCAG 
TCTTTCGAAA AGCTGATTCA GAAGGAAGGA TGTTGACTTC GATGTAAGAA TTATAGAGGA 
TAGAAAGCTT CATAAATACA GCAAGAGAAA GGTTTTCGCG TGAGGAAGTA GCATCTAGAT 
GTGCCGAAGT CCAGCGCTTT TGAGCTCGCT TACCAAGGTT GTCGGCAAAG CAGCTCCACT 
CGCTCCTCCG TAAATATACA TTATTTCAAT TGCCCGACCT GCGTTCCCAT TCATAATACT 
GAGTAGTTCT TCCATTGGCC CATTGTCAAT TCCCCGACGT TCCATCTCTT TCATAAACCG 
GCTGGCACTC GCACTCATAT TCCTCGGTCG TATATCTGGT CGAACGAAGA GGAGCTCAGC 
GCACATCTGC TCGGCCCACG AATCGAAGGA AAGCTGCTTC AGTTGTCCAC AGAGAATAGC 
CATGATGGAA TCGAGTTCAG GAATACGGCG CGAAAGCTTG AAAGACCCCC GACACTCGGA 
TACATACACC TGCCATGATC GATGTTTCTG CATCGCCGCG TCAGAGTTGT ACACCATTGA 
GAAATTCGTT TGACCGCTAG TCGCGCCTTC CCAGAACTTG TAATCCGAGC GTTCTACAGT 
CAATCCCTCC AAGAAGTATT CTGTCTGTTC AATATCGTCG TCGTGCCAGT CAGGTGTGTC 
GAGGCAATCA TCATAATAGT CGTTGCGTCC ACCCGGAAGG GGAGCTCTCA GCATCAACTC 
TTGAAGAATC ATGAATCCCT CACGCGTTTC GTCGAGAGTC GATACCAAGT AAGGGTCATC 
CGAATACGAA TTGAAATGCT TGTTTGAGCG AACAAACATA GAATGCGTAG ACAAAACATC 
CCAGGCCTCT TCCAAACATC CACGTAGCGT TAGGGTACGA ATACACGCCC AAAACAATTC 
GCCGTCCCCG TATTGCTCTG GCTGGGCGGA AGCACTCATT TCCTGTATCG ATGGATAGAT 
TTTTTCAACC TCGAGCATGT GTTGACATCG AAGATAGCGT ACCATATCCG CTGTGGCCAC 
TCCTGGCTTA TCGAAGGGGT CCTGCTGAAA GTTAATATCG TTGTGAGACG GCAACAGTGG 
TAAAAATACG TCAGAGAGAT GCATCACGGT GTAAATCGCT TTGAGAAACT CGAGACTGTT 
GCAATCGTCC GAAGACAAAG CATCTGGACC CCCCTGCTGT TGCTCGTCAT CCCATCCTTT 
CACACAATTT TGAACAGCCG AGCGACATTG CAGTGAAAGC TGTTGAAAGG ATTTGAAAGA 
TTCTCGCTGG TCGTCTTCGT AAAAATCTTC GTGCGCTCGG ATAATCGCGT ACAATGCGGA 
CAACTCGTGC TTGTTGCAGC CTGCACCTGG ATAGGCAAGT TGCTGAAGTA GAGCTGGATT 
TCCATCTTCT GAAGAAACCA AGTAAAGGGA AGCGGGTGAA GATGTGTCCC ACAAGAAAGG 
GCTACTCTCA CGAATATATG AAGCCATCTT TGAAGTGATA TACTTGCAAT CTAAACGGGT 
AAGAAAGAAG CTGCCTGTCG ACGTAGTAAT TGTATTTGTC TTTGATCGGG ATTGCCGGCA 
AACATTGCCG TGTGCCGGTT GCGTGCTACA GGATGCATTG CGCATGTCCA AAGCATGCTG 
CAAGTTTTCA TACGCAGGAC AGACGTGATA TTTTACAGTT GGCTTGTTAA GGTGAATGAA 
AAGCGATAA 

 

Protein sequence

MPSHAPFYIE HLLYAPSQQS SKPETMAARP LVSVFSLSGD KSGDVSLPAV MTAPLRPDIV 
QFVHTNMNKN HRQAYAVNIR AGKQVVASSW GTGRAVARIP RVGGGGTSRS GQGAFGNMCR 
GGRMFDPTKT WRKWNKKINI SQKRYAVASA LAATAVPALV MSRGHVVDNV PEIPLVVENA 
VESAKKTSAA KDILSAIGAL DDVEKAGESK QIRAGKGKMR NRRYTLRRGP LVIYKSNDGV 
EQAFRNLPGV ELCCVDRLNL LQLAPGGHMG RFCIWSQAAL EELDIIYGEN GKRIPQAAMT 
NADLARIINS DEVQSVVNPA KPGQKDNAPK QNAIRNVEAL EKLDPFAAEK RRAQARNDEA 
RASKKAETLA KKRDSRTAKK AFKEQGKSFY AKVNEKR