| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_4896 |
|---|
| Symbol | |
|---|
| ID | 7202065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | - |
|---|
| Start bp | 710930 |
|---|
| End bp | 711583 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181426 |
|---|
| Protein GI | 219122173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCCGACGGG TAATTTTTGT CACGGGTGCC GTGACCATGG AAGGATGCCC ACCATCAGAT
CGTGGCGAAG CAGTCTTTAT TGGTCGGTCC AACGTCGGTA AGAGCAGTTT AGTCAACATG
GTAACCAACC GCAAATCATT AGCGTACACG AGCAAACGCC CCGGGAAAAC GCAACAGTTC
AATTTTTTCG CCGTCAACGA CAAGCCCGGA CGCGAAAAGG AGCTCAAGTA TGGTGACGTT
TTACCTGGAG AAAAGGATCA AGATTCGTTC AATATTGTAG ATTTACCCGG GTTTGGCTAC
GCTAAAGTTC CCGAGGAGTT GCGGAAAGAA TGGTCCATCT TTATGGATGC CTATATCGCC
AATCGAAAAA CACTGCGGGT TTTGTTTCAT TTAGTGGACG GTCGCCACGG TCCGACCGAT
GAGGACGCAT CGATTATGCG ACGCGTTGGC GACTTGTTGC CGGGCTACGC AACCTATGTA
GTGGTCTTGA CGAAAGCGGA CAAGAATGTC AAGGGCGCAG CCTCGAACAA AAAGGCCGGC
AAAGTCTCCA GTGATGTCGT GGACGCTGTT CGTCAAGCCA TGAAACAAAA TGGTGTAGGT
AACGCACCAG TCATTCTGAC ATCGGCTGAA ACAAAGCTGG GCCGTGACGA TATC
|
|---|
| Protein sequence | VRRVIFVTGA VTMEGCPPSD RGEAVFIGRS NVGKSSLVNM VTNRKSLAYT SKRPGKTQQF
NFFADQDSFN IVDLPGFGYA KVPEELRKEW SIFMDAYIAN RKTLRVLFHL VDGRHGPTDE
DASIMRRVGD LLPGYATYVV VLTKADKNVK GAASNKKAGK VSSDVVDAVR QAMKQNGVGN
APVILTSAET KLGRDDI
|
|---|
| |