Gene PHATRDRAFT_47235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47235 
Symbol 
ID7201990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp887418 
End bp888503 
Gene Length1086 bp 
Protein Length209 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181463 
Protein GI219122250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAACTGGTTG CTGATCATGA ATTTCGTGGC ATAAAGGAGA ATATATCCAT GTAGAGCGTG 
GAGAATATTC AAAATCGCTT ACTCACACCC ACATTCGCAA TCCGCTTAGA CAGAATGGCG
GGGCTTGGGC GACGAACACA TTATCGGAAG CACTTGACAG ACTCGATACT TCACGACTTT
CCTGAACCTC TGGGGGACGA ACGGGTCGCC AAGATAGTTG CTACTCGGGG AAGTAATCAG
TTCGACATAG TCTTGTCGGT GGAAAAATCG TTACCAGAAG AGCACTCAGC GACAACGCGA
CCTTGCCACT TGGCCATCCT TCCCACAAAG TTTCGCAAAC TGGTTTGGCT CAAACGAAAC
GATTTTGTCA TCGTTCAAAC AGCTACGGAT GCGGAAGGTG CTGACAGAAA GAACGATTCT
GGTGGAGTTC GCTTTATGAT TACGCATATT CTTTACAAGG AGCAGATCAA GCATCTGCAA
TCGAATGAAC TCTGGCCCGG ATGGGATACG GAATTTACTC AGGACTCGAT AGAGAGTAGT
CCCCAAAATG AAATAACTAC AAACGAGGAT TGTAGTAGTG CAGGGGTCAG ATCCTTCGAC
GAAGAGGACC AAGCTTCGCC GATCGAGGAT GGGATTGTGT ATGCAACTGG ATACGATACA
GATGATGATC TTTTCGTTAA TACCAACAGA CTTGCTAGCT TGCAGGTTCA AGACTCGTCG
GAGACTGAAA GCGACGAAAA CTGATACGTC GACACTGCCA CTGTCCCTGG TGAAAATACA
TACGAGACTG AGACGAAGAA ATGGTTGCTG GTAAGAGACG GCAGCCACAA AACCAGTTGT
TGTCCATCGC AAACTCTGCT GTGGCAAAAA TTTGCTCGCA GTTCAAGACC CGTCGGAATT
GTACTTGGGC TGGCCTAGTA AAAGTAGTAG TAGACAGGTG TCATTGAAAA AAATGCCCAT
TCCACTGTCA ATGCATTCGA AAAGAGAAAA TACGCTAAAG GGGATGGGAA AAGGTGAAAA
ACTCGCTAAT GTAAAGGGGA CAGAACGTGT TCTCTCTAAT GTAATTAGCT TCATTTGGCG
CCAGTA
 
Protein sequence
MAGLGRRTHY RKHLTDSILH DFPEPLGDER VAKIVATRGS NQFDIVLSVE KSLPEEHSAT 
TRPCHLAILP TKFRKLVWLK RNDFVIVQTA TDAEGADRKN DSGGVRFMIT HILYKEQIKH
LQSNELWPGW DTEFTQDSIE SSPQNEITTN EDCSSAGVRS FDEEDQASPI EDGIVYATGY
DTDDDLFVNT NRLASLQVQD SSETESDEN