Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47235 |
Symbol | |
ID | 7201990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 887418 |
End bp | 888503 |
Gene Length | 1086 bp |
Protein Length | 209 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181463 |
Protein GI | 219122250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAACTGGTTG CTGATCATGA ATTTCGTGGC ATAAAGGAGA ATATATCCAT GTAGAGCGTG GAGAATATTC AAAATCGCTT ACTCACACCC ACATTCGCAA TCCGCTTAGA CAGAATGGCG GGGCTTGGGC GACGAACACA TTATCGGAAG CACTTGACAG ACTCGATACT TCACGACTTT CCTGAACCTC TGGGGGACGA ACGGGTCGCC AAGATAGTTG CTACTCGGGG AAGTAATCAG TTCGACATAG TCTTGTCGGT GGAAAAATCG TTACCAGAAG AGCACTCAGC GACAACGCGA CCTTGCCACT TGGCCATCCT TCCCACAAAG TTTCGCAAAC TGGTTTGGCT CAAACGAAAC GATTTTGTCA TCGTTCAAAC AGCTACGGAT GCGGAAGGTG CTGACAGAAA GAACGATTCT GGTGGAGTTC GCTTTATGAT TACGCATATT CTTTACAAGG AGCAGATCAA GCATCTGCAA TCGAATGAAC TCTGGCCCGG ATGGGATACG GAATTTACTC AGGACTCGAT AGAGAGTAGT CCCCAAAATG AAATAACTAC AAACGAGGAT TGTAGTAGTG CAGGGGTCAG ATCCTTCGAC GAAGAGGACC AAGCTTCGCC GATCGAGGAT GGGATTGTGT ATGCAACTGG ATACGATACA GATGATGATC TTTTCGTTAA TACCAACAGA CTTGCTAGCT TGCAGGTTCA AGACTCGTCG GAGACTGAAA GCGACGAAAA CTGATACGTC GACACTGCCA CTGTCCCTGG TGAAAATACA TACGAGACTG AGACGAAGAA ATGGTTGCTG GTAAGAGACG GCAGCCACAA AACCAGTTGT TGTCCATCGC AAACTCTGCT GTGGCAAAAA TTTGCTCGCA GTTCAAGACC CGTCGGAATT GTACTTGGGC TGGCCTAGTA AAAGTAGTAG TAGACAGGTG TCATTGAAAA AAATGCCCAT TCCACTGTCA ATGCATTCGA AAAGAGAAAA TACGCTAAAG GGGATGGGAA AAGGTGAAAA ACTCGCTAAT GTAAAGGGGA CAGAACGTGT TCTCTCTAAT GTAATTAGCT TCATTTGGCG CCAGTA
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Protein sequence | MAGLGRRTHY RKHLTDSILH DFPEPLGDER VAKIVATRGS NQFDIVLSVE KSLPEEHSAT TRPCHLAILP TKFRKLVWLK RNDFVIVQTA TDAEGADRKN DSGGVRFMIT HILYKEQIKH LQSNELWPGW DTEFTQDSIE SSPQNEITTN EDCSSAGVRS FDEEDQASPI EDGIVYATGY DTDDDLFVNT NRLASLQVQD SSETESDEN
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