Gene PHATRDRAFT_47234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47234 
Symbol 
ID7201989 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp886259 
End bp887097 
Gene Length839 bp 
Protein Length262 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181462 
Protein GI219122248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCTTG ATCAGCCTTT GGCCCAAGCA TTTCAGCTCT CTGTTTTCAC CACCCCAATT 
TCTTCTCTCT ACAATTTAGG TATGAAGTCG CCAAGCATTA CTATGTCTGA CCTTTGGACA
GTGTTTGAGT TTATTGGGTT CGTGAAGGCA TATTCTGATA AAGAAAGCAG CGTGGATTGG
TAGTCCTCGC CACACCGGAA CCGTGGGAAC AACATTCCGT CACCAAAAAA ACTCTACGTC
GGACCCGTAA GCGCTGTACT TACGCCCTTG TCGTCTTGCT GGGAATCGTG GGGCTTTTGG
GCGTAACCTT GGGGATTACC AACCGCACGA ACAGTCGCAC CGAAAGCCAA ACGACTGCAA
TAACGGCGAC TGACGGTACA ACTACCGGAG ACGCCAACGG CAATAGTGAC AATTTGGATG
GCGACACCAA CAATGCACTC TCCGTGTCAC AAACGTCCCA CGTCATAGCT TGGCCGGTAG
CCACTTCCTG TCTGGATGAA CCATTTCGGC CACTCGTACG GGTTTCTTGT GGCGCCACGG
AAACGGTACG TATTCGCACC GTCCAAAACG CTAACCGCAC CCTCACAAGC GATCGCACCA
ACGTAGCCAC GTGCGTCCCC AATCAGCTCG CCAATTCCGC AAGGTTGGCG GTTGCCTTTG
GGACTGTACC GGCACCGTGC CGGGGTCCGT CGGCCCCGTC CAAGCGGTGT TGTCCCCGTC
GCTCCCTACC GACACCGCCA ATAACGTTGC GGACGAACCC CGACCAGTCC TGTGAAGGGA
TGCTTACGGA AATTCTGGAT CCCATCATGG GCCTCAATCC TGCCAATCCA GCCACCTGA
 
Protein sequence
MCLDQPLAQA FQLSVFTTPI SSLYNLGMKS PSITMSDLWT RGLVVLATPE PWEQHSVTKK 
TLRRTRKRCT YALVVLLGIV GLLGVTLGIT NRTNSRTESQ TTAITATDGT TTGDANGNSD
NLDGDTNNAL SVSQTSHVIA WPVATSCLDE PFRPLVRVSC GATETVRIRT VQNANRTLTS
DRTNVATCVP NQLANSARLA VAFGTVPAPC RGPSAPSKRC CPRRSLPTPP ITLRTNPDQS
CEGMLTEILD PIMGLNPANP AT