Gene PHATRDRAFT_47206 details

Gene Information

• Locus tag: PHATRDRAFT_47206
• ID: 7201974
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 812244
• End bp: 816162
• Gene Length: 3919 bp
• Protein Length: 1244 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181266
• Protein GI: 219121840

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGTCG AAGGGTATTT TTGTTTCCGC CCTCTCTGGA GAGATGTTCA GACCGAGTTC 
AAAGAGGAGT CAAGGTATAC AGCAAAACTC CCTCTTTGGA GCGAAATATC CTGTAGCATA 
TTAGTCCCAA TCGATATGCC GAGGAACAAC CAACTGCAGC AGGAACGTTG CCAGCGGCAT 
CAAGGACTCT CCTCCGACGG TGAAGACCGC GAGGGCACCG ATGCGTTCAA TTCCCCAGCT 
GCTGCCTTCC AGCACTGGTC TTCCCAATTG CGGCGTCGAT CTCCTCTTCT TTCCACTGAC 
AAAATGTTCT CGACGGAAGA AAACGGCGAC AGCGACGGAG AGAATCGCGA CAGAAGTACG 
AAGAAAACTT CGATGGATGA AAGTTCTGGT TCCAATGGAA TCGTGGCTGC GCGCAAAGTG 
GACTTTTCAC CTCGCCTACA CTCTCACCGG AGCTCAACAA ATAAATCGGC GTCTTTTCCC 
AGCAAAAAAG ACTTGAACGT TTTCAGTGTT TCGAGAAAAG ACCCGGCTAT GACTTGTTCG 
GGCCCGAATC ATCCTAAGTC TAGTCCAATT TCTTCGAAGA TGACAGACAA TTCACCAGCG 
CGTCGGCGTC GAGCCGTACA TGGGCTTCGT CCACCTTCAA CGCCCCACAC TCCTCGATCC 
CCACAGCCAT CTCGTCCCAC ATCCGTACTT CAATCATGGA CGACACACCA ACCAGACCCT 
GACTTTTGGC CCGCTAACGA AAGCATGGAC GTCTTGTTAG CCACGGCATC CGTCGATTCC 
TCTGGCATCC ATAAAGCTCA ATCCCAGGAT CTACCGCTCC ATAGCGCCAT TACACAAGCA 
ACGTGCATTC ACGAGCTGTG GAACGCGACT GTGCGTGACA TAGTTACGGT AGATTCGGCT 
GCCTCTCAGA ACGATGAAGG TCAAACTCCT ATCCATTTGT TTGCGGAAAA TGCAGCTCTC 
GCTGATCAAC TGATTCTTTA TCACAACCCG ACAGCCGCCC AAACACCACC GGATGCGGAT 
GATATGCTGC ATGTCACTCG GTCAGGATTG GATAGTGACG CTCCACAATC CGACGATCCG 
ACGACTTCTC TGGCGGCGGT AGAGAGGCAG CTCGTTCATT TTGGCTTACA TTTACTGCAC 
GCGTATCCAG CTGCCATGAT GACTCCTGAT GGGGACGGTT TCATCCCCTT CGAGCGCACA 
CGTAAGTAAT ATTGAAACCA AAGCTATTGC GGCAAAGTCT GAACTCTTTA GCTAACACAA 
GTTTGATGCG ATCCGATTGA AAAATGAAAC CCTTCAAGTC TCTGAATGGA TCGATCAAGT 
TCATCGAGAG CCAACTTGCA ATCCTCGTAA GCCACAGCGC AATCAGTTCC AGTCAGCGAC 
TGACTTGCTT CCAACACAAA TAACTTCTTT CCTCGCATCT AGTACCACGC GCTGGGCATC 
GCAGCCGAAA AAGTCATTGG ACCTCTCTTA CAAAATTCGG GACGAAACGT CGTCGGACGG 
ATCCTTGGAC GTAGAAAGCG GAGTAACAAC TAAGGTGCTT CCCAAACTCG CGACTGGAAG 
CAAGACACAA GAGAAGACGT TGCATAATCG ATCTCGGCAG TTCCCGGATA AAGTGCAGTT 
GACTGCGCAA GCTCAATTTG CCTTTTTGAT GCTGTCTTCC TTTCTCGATC ATTTGGATCG 
CCGTCTCGAA GAAACTACCT TTCTCAAGAC CCGTCGCTCC AGCCTGGCTA CTTCAACACG 
TCCTTTAACC GGAACTCCTT CTGCTCTCCC CGACGTGGGC GCTTTAGGGG CTGAAGATTC 
CTTCCATGAA GCAATGGACG AACTCCGTCA CATGACTGTC GCCGATATTC GATCCGAGAT 
CGTGCGAAGC ATTGCATCTA TACCCGATCT GGTCAAGACA CTCCTCATCA TGGAAAACGA 
TACCCAGCGT GCGTTTTGTT TCTCAACCAC ACTAATGCAC CATGTGCTTG CGTCCAAGTA 
CTCTGTTGGT CCATGGCTAC CGGCTATGCT GCAGCATAGT GAGGAGCGAA TCTCGGATTT 
GGCAGTCGGC TATCTAAAGC TAGTCTCGGA ACGGGATATC GAGGATGGCA TTCCACGAAT 
GCAATGGGGA ACTAGTGTCC GCGCGTTTCG AAACTCTGGT GGAAAAGTTG AAAGGCACGG 
AAAGATGGAT CTACACGATG AAGTCAGTCG CCTCGAAGAC TTTGTCCCAT CGCTTCTATC 
TCTAGGGGAG CGCCAAATGG AAGAAGCTGC AACAACCAAG CTCGTTCGGA AGGTTATGGA 
TTGCATCATC TCTCGTCCGT TCGCCGTAAC TGTTGTTTTC TGCGACGCCC TGTTTCTCGC 
CATCCTACTT GTTGGGTTTC GTGGAGCCGT CAATTCTCTC TTGCTAGGCG GCGTCTCGAG 
TACCGTCACC CGACACCTAT ATTTGGCCAA CGCTGGCATC TTCTACTTCG TTGTTAGGGA 
GCTGGGAAAA GTTGTTAGCC TGTGTATGAT CACACGCCGC GCACGAGTCT ATTTCCAAAG 
TTTTTGGAAT TTGGCGGACT TGCTGTCAAC GGTCTTGGCT TTGACAAGTA CTATTGCGAT 
GCGTGCTGCG TTAGGACCTA CTGAAACAAA TATGGCAGGC GATACCAACC TGCGCAATTT 
GCTGGCGATC ACCACAGGCT TTTTGTGGCT TCGCGTATTA AATTACTTGA AAGGCATCAA 
CATGCAGCTT GCGACATTTG TTTTGGCGAT TCTTCAGGTA AGTTCAAAGT GTTGGCAAGG 
GACCTCCAAT CTTGCGCGCT TCTATGCATA GACTGACTAA AACTAAACTG TTTTTTAAAT 
TCAGATTACG CGAGACATTT TGTGGTTCTG CGTGATCCTG TTGACGCTCA TCGTTTCCTT 
CGCGCAAATG TTCTTCACGC TCTTGGCCCC GGATACGTGT GTGGCTGGAG ACATCCTGAG 
CAATAAGAAG GAATGTACTC AGTCTGAGTA CTACCTCAAA GTCTACGCCA TCCTACTGGG 
CGACTTCGGA ACGTTTGAGC GTGAAAGCTT TACTTCTATG TTTTCGGTGT TTCTGGTTGT 
GTTTTACTCC TTCATGGTGG TGCTGATTCT GCTCAATATT CTCATCGCTG TTGCATCGGA 
TAGCTACGAA AAATGTTTAA TCCGATCCCA GAGCTTGTTT GGACGTGCCC GGGTCATGAT 
GATTGCAGAG CTTGTTTCAT TTCAGAATTT ATTGCGCAAG AATCCACATG TACTGTTGGA 
CTCGTCGTCA ACGGGTCCGA CCGCGCCTAT CTATAGGACC TGGTTATCTG GCAATTCATG 
GGCAAACGGG TGGAGTCGAG GATCCATGAC GTTTTTCCTC TTATCGTCAA CTGTCGTGCT 
CGTTTGGGGT ATCGCAGAGA CTGCTGGATA CGCAACAGGG AACCGTAATG TAAACGTGTG 
GATGAGCATA TCGTCCATCG CGATCAACGT CGCTCTATTT GTCGGCATTG TTATCTTTCT 
TTCAACCGGT GGTACTGAGA TTGGCCCAAC ACAGCTTGAA GGCTACCTTC AATTTGTCAT 
GCTACGGCTT CTTGGGTCGA CCAAAGACAC TACAAATACG GTGACTGGCT CTGACCACGA 
TGGTTGGCAG GGCCGGCTCG TGTACATCAA GACAGAGATT AAACGCCTTT CGGACGAAGC 
CAAATCTGAG ACAGCTGCAT CAACTAAATC TCTAGTAAAC CTCATTGGCA CTACGGAGGG 
ACGGCTTCAA GATGAACTGT CTCGCGTAGA AATCGGCTTA AACGAGCTGA AACAACTTCT 
GCAGCCAGGG CAATTGCCAT CCTATCAACC GAACGAAAAG AAGACAACAA TTGCTAATAT 
TCACAACACC ATGAAAGACC TCGTCGAAAC CCTGCATCGG ATGGAGACTG CGGAAGAAGT 
GAAGGGAGGA CAAAGTTGA 

 

Protein sequence

MSVEGYFCFR PLWRDVQTEF KEESRYTAKL PLWSEISCSI LVPIDMPRNN QLQQERCQRH 
QGLSSDGEDR EGTDAFNSPA AAFQHWSSQL RRRSPLLSTD KMFSTEENGD SDGENRDRST 
KKTSMDESSG SNGIVAARKV DFSPRLHSHR SSTNKSASFP SKKDLNVFSV SRKDPAMTCS 
GPNHPKSSPI SSKMTDNSPA RRRRAVHGLR PPSTPHTPRS PQPSRPTSVL QSWTTHQPDP 
DFWPANESMD VLLATASVDS SGIHKAQSQD LPLHSAITQA TCIHELWNAT VRDIVTVDSA 
ASQNDEGQTP IHLFAENAAL ADQLILYHNP TAAQTPPDAD DMLHVTRSGL DSDAPQSDDP 
TTSLAAVERQ LVHFGLHLLH AYPAAMMTPD GDGFIPFERT LSEWIDQVHR EPTCNPRKPQ 
RNQFQSATDL LPTQITSFLA SSTTRWASQP KKSLDLSYKI RDETSSDGSL DVESGVTTKV 
LPKLATGSKT QEKTLHNRSR QFPDKVQLTA QAQFAFLMLS SFLDHLDRRL EETTFLKTRR 
SSLATSTRPL TGTPSALPDV GALGAEDSFH EAMDELRHMT VADIRSEIVR SIASIPDLVK 
TLLIMENDTQ RAFCFSTTLM HHVLASKYSV GPWLPAMLQH SEERISDLAV GYLKLVSERD 
IEDGIPRMQW GTSVRAFRNS GGKVERHGKM DLHDEVSRLE DFVPSLLSLG ERQMEEAATT 
KLVRKVMDCI ISRPFAVTVV FCDALFLAIL LVGFRGAVNS LLLGGVSSTV TRHLYLANAG 
IFYFVVRELG KVVSLCMITR RARVYFQSFW NLADLLSTVL ALTSTIAMRA ALGPTETNMA 
GDTNLRNLLA ITTGFLWLRV LNYLKGINMQ LATFVLAILQ ITRDILWFCV ILLTLIVSFA 
QMFFTLLAPD TCVAGDILSN KKECTQSEYY LKVYAILLGD FGTFERESFT SMFSVFLVVF 
YSFMVVLILL NILIAVASDS YEKCLIRSQS LFGRARVMMI AELVSFQNLL RKNPHVLLDS 
SSTGPTAPIY RTWLSGNSWA NGWSRGSMTF FLLSSTVVLV WGIAETAGYA TGNRNVNVWM 
SISSIAINVA LFVGIVIFLS TGGTEIGPTQ LEGYLQFVML RLLGSTKDTT NTVTGSDHDG 
WQGRLVYIKT EIKRLSDEAK SETAASTKSL VNLIGTTEGR LQDELSRVEI GLNELKQLLQ 
PGQLPSYQPN EKKTTIANIH NTMKDLVETL HRMETAEEVK GGQS