Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47199 |
Symbol | |
ID | 7202188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 791589 |
End bp | 792680 |
Gene Length | 1092 bp |
Protein Length | 323 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181263 |
Protein GI | 219121833 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTTTCCCAGA TTCAGCTCAC TCTCATCTTT AGATACCTTC CTGTCAAACA TCGAGTTGAT ACTCGCTACC ATATTTATCG CCGCTGTAAA ACCAAACATT TCTGCTCCAA GAAAGCAAGA ATGATTCACC GGATCCTCTC CGTCCCGAGA AGCATCGTAA AGTCAAGTCG CCTGTCAGTT GCGAAACTTG GTACGCTACC GGTCTCATTC CCAAAAATTC GAACCTATTC GTCGACGGTA CCGGCAAACG AATCGAAGCC TTATCTTTCG GGAAATTCGA CTCATTTTGG TTTCGAACAA GTAGCCATCG ACCAAAAGGA AAGTCTCGTA CGTCAAGTAT TTGATAATGT CGCGGATTCT TACGATGTCA TGAATGATCT CATGAGCGGT GGACTGCATC GATACTGGAA AGACTATTTG CTGGAAGTAT CATCAGTGGA ATCCATGGCC TCGGCGGTTC GTCGCACCAA CGGGGACCTT CGTATTCTCG ATGTCGCAGG CGGGACGGGA GACGTCGCTT TTCGCTTTGT AAACGCGGCA GGATGCGTAG AACGGGCCAA ATCGTCCGGA GAAGACCCGG TTTCCGTCAC GGTCTGTGAT ATTAATCACG AAATGTTGCG TGTTGGAGAT GTAAGAGCAC GAAAGCGCTT CGGCAATTCT CTTTTGGATG ACAGCCGAGG CTTACGATTC ATGCAAGGGA ACGCCCAGGC GCTTGAGTTT GAAGACAACT CTTTCGATTT ATATACGATT GCTTTTGGGC TACGTAACGT GACGGATGTG GACATGGCGC TACGAGAGGC AAATCGTGTT CTCAAGCCGG GTGGACGATT CATTTGCCTC GAATTTTCCC AGGTTCCCAA CGAGCTGCTT CGAACGATCT ATGATACTTA CTCCTTTCAC GTGATACCCG CCATGGGTCA GATTGTAGCA CAAGATCGAG AATCGTATCA GTATTTGGTG GAGAGCATTC GGAGATTTTC AAATCAGGAT GAGCTGGTGA CTCGGATGAA GAACGCTGGT TTTCAGGTAT CTCGGTACAC CAATTTGACT GGTGGCATAG TTGCATTGCA CGAAGGCTGG AAGAGCGTAT AG
|
Protein sequence | MIHRILSVPR SIVKSSRLSV AKLGTLPVSF PKIRTYSSTV PANESKPYLS GNSTHFGFEQ VAIDQKESLV RQVFDNVADS YDVMNDLMSG GLHRYWKDYL LEVSSVESMA SAVRRTNGDL RILDVAGGTG DVAFRFVNAA GCVERAKSSG EDPVSVTVCD INHEMLRVGD VRARKRFGNS LLDDSRGLRF MQGNAQALEF EDNSFDLYTI AFGLRNVTDV DMALREANRV LKPGGRFICL EFSQVPNELL RTIYDTYSFH VIPAMGQIVA QDRESYQYLV ESIRRFSNQD ELVTRMKNAG FQVSRYTNLT GGIVALHEGW KSV
|
| |