| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47176 |
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| Symbol | |
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| ID | 7201956 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | + |
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| Start bp | 717403 |
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| End bp | 720295 |
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| Gene Length | 2893 bp |
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| Protein Length | 435 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181253 |
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| Protein GI | 219121812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTATCCCTC TCTCTCTCTG TGTGTGTCAA ACGCGGCAAG CCAGTGAGAG TCAGTCGACA
GCGCTGATGC AACGAAAGGA CTTCCATTAT GAACGCCTCG GATCGGCCCA CGCTACTCTC
CATTGAGGAG TTAAGCGTCC TCGTTTCATC CCCCGTTCGC ACGCACTTGG CTGGTGCGTA
TCGTGGTCTG TATCCCGCCG CCAACGATCC AGCACAAAAG CTGCAGCACG AACAGCATCT
CGAAAAGGTG CTTGCCGCCA TGAAAGTTTC GCCCCGGACG TCGACTTTTC GCGTCAATAC
AATCCGCGCA ACGCGCACAG AGGTTGTGGA CAAACTGGTT CTCGCAATGA ATGAGTGGGC
CGAGCGAGAA GGCCTCTGTA CGCCCAATCC CTTGCCAATC TCCGTCGCGG CTCATGCCGT
GCTCGAGGAT ATCGTATCGG TTGATATTGC CCAGTCTCCG ACGACACTCT CCTCATGTCG
AATACCGCCC CTCCAGGTGG AGCTCGACAC CGACTCATCG TTCGGGGACG AGGCGCGACG
CGCCCGCCGT CACCGCCTGG GCTGGCCCAC CACGTGTAAG GTGATTGTTT GCGATCGCTT
ATGCGGAGAA GCGGTTCTCC GCGGATCGCA CGTTTTCGTC CGCGGAATCC TCGCGGCAGA
TCCCTCCATT CGAGTGGGGC AGGCCCTGGC CGTCTACGCT GACTTGCCGC AACCCCAACG
ACCGTCTTGG CCTCGTGGAC TTGCCGTTGA GTCCTACACT GGAACCTGCG TCTTTGTGGG
AATCGGCCAG GCGTGTTGCA CCCACGCCAG TTCTTTCGAC AGTCACAGGG ACTGGGTGTT
CGCATGCGCT CCCTGCCACG AGTGGGGCCC CTCCTGCCCC CACTTTCCGG TGTACTGGAC
ACGCACGCTT TTTTACAAAA CCTACCTTCC ACCGTCGTGG TACACGCACT GAATCCTCAA
CCCGGCGATA CAATCCTCGA TCTCTGTGCC GCTCCAGGTG GCAAAGCCTC GCACGTGGCG
AGTTTCACAA AAAATCAGGC CGTGATCTTG GCCGCTGATC GGAGTCGGTC CAAGGTCGTC
GCCATGAAAC AACGCTTCCT GGCACTAGGA TGTACCAGTA TCGTACCCTT GCATCTTAAC
GCAACTGCAT GCTGTATGGA CGAGCCCGGG CGGCCTCGCT GCAGCGTGGC CGAGGTACGT
ACGCGCCTGT GGATGGGTGT CGGAGTAGCA GCTGTTCCTT GAGGAAGTGT GTGTGTTTCG
CCACTTTCTC ATTCTGAGCA ATAAATTTGG TTTGTTAGAT CCGCGCCGCG GCCAAAGTCT
CGGAGAGGGA CGGACTCTTG AACGTGAAAT ACTTTTTCCC GGGATCGTTC GATCGTATTT
TGTTGGATCC ACCCTGCAGC GCTTTGGGTC TACGCCCCAA ACTGCAGATT GGACCGACCC
GGGTGGACGA TCTGCTCGCT TTTGCCACAT ATCAGCGCAA ATTTGTCCCA CCGGCAGTGG
CCTTGCTGAA ACCGGGTGGT ATTCTGACTT ACAGTACCTG TACCTTTCAC GTGGAGGAGA
ATGAACGCAT GGTGCGGCAT ATTCTGGACG ACTATCCGGT CATGGAGTTG GTGCCCATCA
CCATTGGCGT TGGTCTACCG GGTTTGCCCG GACACGGATT AACGACGGAC GAATGCCAAC
GTGTGCGACG ATTCGACCCC ACCGACAGTG CCGATACTAT GGGATTTTTC ATCGCCAAGT
TTCGGAAACG AGCGACTACC GCCTACTGTA ACAGTACAGC AGGATCACTC CTATAATTTT
TTTAAGTGCC TAATGAATCG AACAGTTGTT ACTGTTCCCA CCAGTTAAAC CCGCCAGCGC
CGCCGGCTCC TTGTCCGTAG TAACTCGATG GATCCCAACC AGTAGTCTCT TCTCCCGGAC
GCACCGGAGG CTGTTGCGAC TGTGGAGCTC CCGGAGGCTG TTGCTGCTGC TGATGGTGAG
CTTGTTCGGC CTGATAGCCT TGTTGCTGTG GCGCACCGTA TCCGTTGTTA TGGTAGCCTT
GTTGTTGTTG GTGGTGGTGC GGCTGCTGCC CACCGTAAGT ACCGTAGGGA CCCGATGGGT
GCTGCTGTTG TTGGTGTTGC TGACCAGGAT AGGCAGGAAC GCCAGGCGGT GGGGGCAAGT
TGGAACCACC AGTAGGGGGC GGGGGAAGAT TGCCCGATGG TGGTGGGGGA GGCAAGTTGC
TTACGGCGGC GGGCGGCGGT GGTGGCAAAA CAAAAGCCGG CGAGGCCCCA CCAGGTGGAT
TGGGCGGACC ACCGTTGGCC GCTTCCGCCG CCGAGGTGGG TTTGGGGCCG TCTAATTCGG
CCATGAAGGA CAAATACTCC GTATCGATTT CTTGAGCATT CTTCTGGTCC GTCGGCGGCG
CCACTTTTTG TCGACAATCC CTCGTCGGGT GACTCGTGTC TCCGCAAATG GCACACTTGA
CCGTCAGCGT GGGTTTGTTG ACCGAAAACC GACGGGGACA CTCAAAGGAG CGGTGTCCTT
TTTCGGCACA AATCTGACAG AACTCTTCGT CCTTGAGTGT GCCGTTGAGC AGAGCCAACT
CTCGCAGCTG TTGTTGCTTG TGTACGTTCT TTTCGTCGTC AATGACGACG AGCATTTGGT
CGATCATCTC GGAGGCCGCA TCCACGGCCC GCTGGTCGTC TCCCGTAATG ACAACGTGTA
GGGGTTCGTT GTCGCCTTCC ATGATTTTTC CGTCACGTCG TCCCCGGGCG CCATCCTTGA
CGGAACCCCG GCCCCGAATA GCAATCTTGC AACCCGTCTT GGATTCGAGT TCCTTCTGCG
TTTTCCCCCG CGGACCAATA ATGAGACCAA TAAAGTTGTA AGTAGGGTGT TTCTCGATAG
GGATGCGAAT TTT
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| Protein sequence | MNASDRPTLL SIEELSVLVS SPVRTHLAGA YRGLYPAAND PAQKLQHEQH LEKVLAAMKV
SPRTSTFRVN TIRATRTEVV DKLVLAMNEW AEREGLCTPN PLPISVAAHA VLEDIVSVDI
AQSPTTLSSC RIPPLQVELD TDSSFGDEAR RARRHRLGWP TTCKVIVCDR LCGEAVLRGS
HVFVRGILAA DPSIRVGQAL AVYADLPQPQ RPSWPRGLAV ESYTGTCVFV GIGQACCTHA
SSFDMGPLLP PLSGVLDTHA FLQNLPSTVV VHALNPQPGD TILDLCAAPG GKASHVASFT
KNQAVILAAD RSRSKVVAMK QRFLALGCTS IVPLHLNATA CCMDEPGRPR CSVAEIRAAA
KVSERDGLLN VKYFFPGSFD RILLDPPCSA LGLRPKLQIG PTRVDDLLAF ATYQRKFVPP
AVALLKPGGI LTYRE
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