Gene PHATRDRAFT_47159 details

Gene Information

• Locus tag: PHATRDRAFT_47159
• ID: 7202056
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: -
• Start bp: 644991
• End bp: 650728
• Gene Length: 5738 bp
• Protein Length: 1633 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002181416
• Protein GI: 219122152

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0929677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACGAAGTAA CAACCTGCCA GGGTAAATTC GACGTAAGCC CCTTGTACGA TGCTTCGTTT 
CCTGTGTTTC GCCATGATGG CCTCGACGGC GCACGTTGCG GCTCAAAACA CGGAATGCGC 
CATGGCGACT ACCATTACGT CACTTCCGGC TACTCTCGAT GGCGACCTCG CCATTGCGCC 
ACCGATCACG CATTTGAGAA CCGACAGCTG TGCTATAGCT TCCACCGGCC CTGTTCCTGG 
TAATTGGTAT ACATTCACGG CCGAAAGCGA TGGCTGTCTC ACTGCCACCG TCGAGTCCAC 
AAGCCAACCT TTTTTCGATA CCATTCTCAC AGCCTACGTA GATGGTTGCG ACGCATTATC 
TTGTGCAGCA ATGAACGATG ACATTAGCAT CTTTCGGGTA GACGTAAGCC AATTGAATAT 
CAATGTCGAG GCCCAGACGA CCTATCACTT CTTTGTTCGT GGACTTTTTC CGCAAGAGTT 
TGGGTCTTTT ACCTTCAACA TCACGGTAAG CAGACTTTTC ACATCATACT TTGTATCGCT 
TTTGAGCCAA TTTCATTCAC GGTTCTTTTC ATTCGCAGCA AGCGGACGGT ACTTGCGAGA 
GACCTACCGG TAATACTTGG TGTTCTGCTT GCCCCAACGG CGGAGTCGCG GATCCGTCTG 
CCGTCTTTGA TATCGAAGAA AACGTGCGCT GTAACGACAT GGGCGAGTAT TTTGAACTCG 
TCGAGGGATC AGAAATTTGC ATTAGTCAGC AAATCGTCGG TTCTGTGGTG TGTGGATGCC 
AGCCAGTGAA CGAAGTGACT TGTCCGCTGT GCCCTGGAGG CGAAGATGTG CCAGACCCGG 
ATCTTCCTGC CGGGACGCTG TCCGGTGGCA CCACGTGTGG TGACCTCAAT GTTGTGTCTG 
GCGTGGATAG TTGTGGGGCG TACAAATCCG GCCTGGCAAA TCAATGCCAA TGCCCCGGCT 
CCCCGGAACC TTGCATTATG TGTCCCGGTA GCACTACCTA CGACCCCGCT GTCGTGATCC 
TAAACGAAGA AGATTCTCTC ACGTGCGGGC AACTTGCGAC GACGTTTCAG GAACTTCAGG 
TGCTGTTTCC GGTTACTGTC TTTTGTGAGC CCTTGTTGAT GGACTACTTG ACGGGACTGA 
ACGTGGTGGA TTTTTGCTGC AACGCAGCGG AGCTCGTGTC TGCGGTAGAC GCAACATTGC 
CTCCGTCACC ATTGGTGTTG ACGGACGCTC CCTCGCCCCG TCCCGAGACA GATGCGCCCG 
TTACCCCGAC TCCGGTGTCC ACTCCGGCTC CAGTCGGCGA GACTTCCCCC ATTGACACTC 
CCGCGACGGC TCCCATTTCC TTCGGATCCC CGGCTTCCAA CGGAGTGGTC CGTTCGGTTT 
CCTTTGTGAC AGCGCTGGGA CTTTTGGTCC ATAGCTATCT AGAAATGTAG ATGGCGCTCG 
GTAACAGTAG ACTGTGAGTA ACTAGCTAGA GCCTTTGCAA TTCGTCACAG TCCGATTTTC 
CTTGGATGTT TGCTACAATA GTCCCGCGAC TGGTTTCCAG TGAATTAGAC ACTGTGACCA 
AAGCGCAAGG CGTAACAGTC ACTGTCAACG ATCCGTTGTG CAGACGTCGC CGGTGTTTGT 
TTGTGATGGA CGCTACCACG CCACGGTCCC GCCCCTGGGG CTGACGAGGG CTTGCCCGTC 
CGCTTCGACC ATCCATCGCT CGCTAGAAAT GGATGGATCT AGTTGGGTGC GTAGTGTTCG 
TAAGAGTACC ATGGACGGGA GGATTGTGTC TGCTTCGGGC CGTGGACGTG CCAAGTCCCT 
TCCCTGTGAG TGCCGATCGA TGCGTACGAT TTCTGTTGCT CAACGCTGGA ACGTAGAATC 
TGTCGCGAGT CACCCTATAT AGTACAGGGT TCTACCGTGC ACTACCGTCC ACCGTGCCTG 
GAAACGCACG ACACGAATCC GCAGCACACG CGACAATCGA CGGATTCCGG TATTTATGGT 
ACATTCACAG TCAGTGTGAC TCTTCGTATT CTCATTGTTA CCAGTTTGGC AGTTGAGTTT 
TGGGGGGTTT TGGTTTGGGA AACTCCGTCC CGTCGGACCA CTTTCGGGAA CTCCGGATCC 
GTGCAGACAT CCCCGCATTG CGGACAGTAC AGACTACTCA TACACACACA CACTCTCTCT 
CACACACACA CCGAGACAAT TGTCGAGTGA AAGAGCTAGT GTAGGCTTTT TCGGTCTCCA 
AGAGCGGAGC GTGAGTCGAC GTGTACGGTA GTGTGCGATA CAAAGAAAAA AGCCTTTGGT 
AGAGCACCCT TGTCGTATCG CGTCGTACCG TCCCACAGTC CGTGAAAAGT CTTCCCGGCA 
GTAAACTTGC GTCTACTTTG ACGGAGCCGC AGTCCTCTTC CGACCGACCG ACCGAGGTAC 
CGACTTTTTG GCCAACACTT TCATATCCAA AAAATGACAA CGGAATTCGA TTCGAACACG 
AACGACAATG ACGACGATGA CATGGCGGAT CTCTTTTCCT TCGATTCGTC CGACGTGCCC 
TTGGCGTCCC CCCACGACAT TGTTGAGACC GGTATTGGCG CTGCCGACAC GGCGACGGAC 
ACCGAACGTC CGCGCAAAGC GTCCAGTGAT TCCTTCCTTG CACTCCTGGA GAGTGCTACG 
GAAGGGACCA CCAACGCAAC CACCGCCGGT GCCCTGGGAC GCCTAAATGG GGATTTGGGG 
GACCACGACG TGGAAACCCA AAATATTCTC GACTGGCTCG ACGAAGACGA CGTCAATGCG 
GTCCCCGACG ATGACAACAA CACACTCAAT ATTAACCAAA ACACCAGTAG TGCCAGCGGA 
AGCGATCCCA CAGCCGCGAG TATCCTGGCG GGTCTCCCCA CGACCGAAAC ACCGACGTCG 
ATCGACGCTT CGTTGTCTAA AACCCCGTCC AACGAATCAT CCTTGACCGT CACTCCGGTG 
AAGACCGCGG AACCAACGGT CGTCGCCTTG CCACCGGTCT TTGCGACGCT TCGGGAAGCC 
CTGGAAAGTC CCCAAGCAAC CGTTGGGCAA TTACGTCACT TGTACGCCAC TGCCCATCCG 
GTCGTCGACG CCGATCTGCG CGCCGACTTG TACTGTCGTA TGGTCTGTGG CAAATCGCTC 
GCCGAGACAC AGTCCAGCAG TTTGGCCGAT TCCTTCCAAC ACTGGCCATT GCCGGAACCG 
GGCGCGTCCA ACGCACCCGA CACGATGCTC CAAGCCTTGC CGGAACTGCC CACTTTGGCA 
TTGCGCGTCG CCACCGAAAC GCACCGCGAG GTGTTGGACT GTCAAGACGA TTTGACCAAA 
CTCCTGGCCT ATCATTGGCA ACAAAACAGC ACCGCCGCGC CGTCGGAAGC CGATTTACTC 
GTGCCCGCCG TGGCGGCGGT AATCCTATCC ACCAACATGC CCGTGGCCGC CGCGAGTGTT 
GTTCTGGCCC AGCTCCTGCC AGCCTTTACA CCCGTACTCG CCCTGGAACC GCCGGAGCGG 
TGGGAGGCTG CGCTTTCTCT ACACTCCGAA CTTTACCTAC TGGTCTGTTA CCACCTGCCA 
CTGCTGGTCT ATCATTTGGA TCAGTACGCA CCCGGATGGC ACTGGCCCAA GCTCCCGGCC 
TCGGTTCGCC AAAAACAGGA CGCCGGGGAG ACCAGCACCC ATCTGGCTCG AAATTTGACC 
CGGCACGGAC GGATTCCGCC TTCCTGGACA CTCAGTTTGG CGGCGGGAGA ATGCGAACAC 
GTGGCTTCAA TCTTGCCGAC GGGATGGATC TTGCAATTGT GGGACGGAAT CTTGATGGAC 
GCTTCACAGC AACATCAGGC AACTCCTTTT TTCTGGACGG TGGCCGTCTT TGAACAAGCG 
GCCGATCAAC TCTTGCTCCT GACGGGCGAG GAGCTGTTGG CCGCCTTGGA CAAAATCTTT 
CAGTTGGAAG ACAAGCGCAG TACGGACGAT TGGATGGATG AGTGGCGCAT GCGAGTTCAC 
AGCTTGCAGC GCTCGACGCC AGAATCTGTC CTGCAAACGT TACGTCGAGC CGAAGACGAG 
ACCGTCCAAG CGTCAATTCG TCGACGACAA GAACGCGCCG AGGCCGCGAT CAAGGCGCGG 
ATGGAAGCGG AAGCAATCGC GCATCTGGAA ACGCAGGAAC GCAAGGCGGA GGAAGCCCGG 
GCACGCTTGA CACGGGCCCG CTTGGTGGCT TACTACCGCA AACACGCTCC GGACAAGGAA 
GACAACATTG ATCAGATTCT AAAAGTTTAC GCGGGTCGAC TGGATGTTTT GGACGGGAAG 
TTATTGAAAA AGTACGGTGA ATCGTTCAAC CCTGCCTTGA AACCGAAACA ACCCAAACCG 
GTGAACAAGA TTGCTGCCAA CCTTCTCATG CAAACCATGA ACCAAGGACT CGGCCGACGG 
CCACAAGTTG CTTTGGAAGA TGTTTCGGGA GTCGCCGCCG GTCGCCATGC CGACAAAGTT 
TCGGTGTTGG TGACGGCTGA CGAAGTCTTA TCCGATCTCT GTTGGAGTAA AGAAGCCGCA 
GTTCACCGCG GAGAACTCCG CCGCAATCGA ACGGAAGGTC GCAAGCATTT GAAGTTTTAT 
CTTGTAGACA GTCGCGCCGA AGAAGCTGCT TTAGAGCAAG GCCGGTTTCC GACCGCTGTG 
AGTCTCAGCC CCGAAGCAAT GCTAGATCCG GAACGAATTC AACTGAACGA AGAAACGTTC 
GAATCGCTAC GTGGCGCGGT ACACATTGTC ATTATGGGAG AAGGCTTTTC GGCCATACCC 
AAACTGTACG GACAAAAGCT ATCTCCCAAA CTCGAGGAGC TGATGCAGCA AGACGAGTCG 
CGTACCGACA TTTGCGCTCT ATTCTTTGTC AAGAAGGGCT TTCCCTTTGT TTCCGTTTTG 
GACGGAGGAT TCGCCGCAGC GCACTCGTGG CTCGTTCGCG AAGGTCCGTC GTGTCACCTG 
AAAGCTGCTG CGGTTCTCGT GGACTACAAT TCGGAAATGT CATTGTTTGG TCAAATGGAG 
ACGCTCCACA ATGCTTCAGC AGCCGAAAAG GCACAACGGA AAATGCAAAA CTTGCTGGAA 
AAGTCACTGG TGTCCATGAC GCGTCGGGCC CAGCAATTCG AAAAACTCGC CAACGAACGG 
GACTCTCGAG AAGGTCGGAA GAACGTAGGG CTGCAATTTT TCAAAAGCAA GCAAGTAGCC 
GAAAATGCGA ACGAAGCCAC GAATGAGTTG CAACCAGCGG ATTCACAGTC AATCGCGGAT 
GAAAAGAAAC TGGCCTTTAA GAACCCATTT AAAGGCGTAG GTAGAGCCTT GGATTGGACT 
AGATCGCCGG ACGATTCAGC ACCTGCACCC GAGGCTCCGG CTCCCATCGA TAACGGAGCT 
TTTGAGGCAG CCGAGCAAAC GACGTCCGCT TTCAAAAATC CATTCGCCGG CGTAGGAATG 
GGTCACGCGC CTAGTACATC TGACAACACG GCTGAAACGA CAGGTGCCTC TGGAACAAAG 
ACCGCCAATA CCACAGCCAC CGACGACTCG AGCAGCAAGG CTAGTGTTCC GTTGATAAAA 
CGTAATCCGT TTGCTCGCTT TGGTAACAAA GAGAGCAATC CAGCAGGTGC TTCTACAGAC 
AGGAAGGGCG GCTTTGATTT TACCAATTTT CGCAAGAATG CGACAGCTCG ATTGCTTTCG 
CGTGACGAAT TCGATGCCGC TTCGGTGGAA GAGTCTATTT CGTTTGATTA GAATTAGTAT 
TAGCAACCTG ATTAGTTAAC ATCAGCTCTC AAGAGGCA 

 

Protein sequence

MLRFLCFAMM ASTAHVAAQN TECAMATTIT SLPATLDGDL AIAPPITHLR TDSCAIASTG 
PVPGNWYTFT AESDGCLTAT VESTSQPFFD TILTAYVDGC DALSCAAMND DISIFRVDVS 
QLNINVEAQT TYHFFVRGLF PQEFGSFTFN ITQADGTCER PTGNTWCSAC PNGGVADPSA 
VFDIEENVRC NDMGEYFELV EGSEICISQQ IVGSVVCGCQ PVNEVTCPLC PGGEDVPDPD 
LPAGTLSGGT TCGDLNVVSG VDSCGAYKSG LANQCQCPGS PEPCIMCPGS TTYDPAVVIL 
NEEDSLTCGQ LATTFQELQV LFPVTVFCEP LLMDYLTGLN VVDFCCNAAE LVSAVDATLP 
PSPLVLTDAP SPRPETDAPV TPTPVSTPAP VGETSPIDTP ATAPISFGSP ASNGVTSPVF 
VCDGRYHATV PPLGLTRACP SASTIHRSLE MDGSSWVRSV RKSTMDGRIV SASGRGRAKS 
LPFSVTLRIL IVTSLAVEFW GVLVWETPSR RTTFGNSGSV QTSPHCGHPL PTDRPRYRLF 
GQHFHIQKMT TEFDSNTNDN DDDDMADLFS FDSSDVPLAS PHDIVETGIG AADTATDTER 
PRKASSDSFL ALLESATEGT TNATTAGALG RLNGDLGDHD VETQNILDWL DEDDVNAVPD 
DDNNTLNINQ NTSSASGSDP TAASILAGLP TTETPTSIDA SLSKTPSNES SLTVTPVKTA 
EPTVVALPPV FATLREALES PQATVGQLRH LYATAHPVVD ADLRADLYCR MVCGKSLAET 
QSSSLADSFQ HWPLPEPGAS NAPDTMLQAL PELPTLALRV ATETHREVLD CQDDLTKLLA 
YHWQQNSTAA PSEADLLVPA VAAVILSTNM PVAAASVVLA QLLPAFTPVL ALEPPERWEA 
ALSLHSELYL LVCYHLPLLV YHLDQYAPGW HWPKLPASVR QKQDAGETST HLARNLTRHG 
RIPPSWTLSL AAGECEHVAS ILPTGWILQL WDGILMDASQ QHQATPFFWT VAVFEQAADQ 
LLLLTGEELL AALDKIFQLE DKRSTDDWMD EWRMRVHSLQ RSTPESVLQT LRRAEDETVQ 
ASIRRRQERA EAAIKARMEA EAIAHLETQE RKAEEARARL TRARLVAYYR KHAPDKEDNI 
DQILKVYAGR LDVLDGKLLK KYGESFNPAL KPKQPKPVNK IAANLLMQTM NQGLGRRPQV 
ALEDVSGVAA GRHADKVSVL VTADEVLSDL CWSKEAAVHR GELRRNRTEG RKHLKFYLVD 
SRAEEAALEQ GRFPTAVSLS PEAMLDPERI QLNEETFESL RGAVHIVIMG EGFSAIPKLY 
GQKLSPKLEE LMQQDESRTD ICALFFVKKG FPFVSVLDGG FAAAHSWLVR EGPSCHLKAA 
AVLVDYNSEM SLFGQMETLH NASAAEKAQR KMQNLLEKSL VSMTRRAQQF EKLANERDSR 
EGRKNVGLQF FKSKQVAENA NEATNELQPA DSQSIADEKK LAFKNPFKGV GRALDWTRSP 
DDSAPAPEAP APIDNGAFEA AEQTTSAFKN PFAGVGMGHA PSTSDNTAET TGASGTKTAN 
TTATDDSSSK ASVPLIKRNP FARFGNKESN PAGASTDRKG GFDFTNFRKN ATARLLSRDE 
FDAASVEESI SFD