| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47152 |
|---|
| Symbol | |
|---|
| ID | 7201941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | + |
|---|
| Start bp | 629230 |
|---|
| End bp | 630793 |
|---|
| Gene Length | 1564 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181238 |
|---|
| Protein GI | 219121781 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCG TTTGGGGTGT CGATCTTCCT GGCGGTGCGC GGCTCCGTCC GAGTCAGCCC
CACTACGCGC AGGAAACGGA GAAGGCGCGG CGGCGTGACC GGTACGGTAC ACGTGCCGGT
GTTCGTTTGC GCCAACGGCT ATAAAAAAAA GACATTCACT CGGCACCACA CCGCTGGCCG
TCCACAATCC CGCAGACCAA CGTGTTTCCA CACATCCCTT GCGCAAGTTT TGTACCATGG
TCGAAACGAA CGGAACAAAG CCCACGGCGC CGGTGGAAGA TTACACGCCG GAGAATATCC
TTGTAACGGG AGGAGCAGGT GAGTAACGGG CGGGTATCAA TCAGCTTACT GCAATGCAAA
ACGAACGAAC CCAGCAACGC CCCCGTATGA CCAGTAAGGC GACGACACGG GTACGGAGTG
TATCCCTCGA CTGTATTCCT GGCACCACGG TTTCGCACAC ATTTCTCCCT TTTCACGCGC
CTCACGTCAC TGTACGAACC TCTTCTTCTC TTGTTTAGGT TTCATTGCCT CGCACGTGGC
GATTCTCCTT TGCAAAAAGT ACCCGCAATA CAAGATTGTC GTCTATGATT GCCTGGACTA
CTGCGCCTGT CTCGCCAACT TGCAAGAGCT CTTCGACTTG CCCAACTTCA AATTCGTCAA
GGGAGACATT GCCTCGCCTG ATCTCGTCAG TTACGTCCTC CGCGAAGAAA AGATCGACAC
CATTCTGCAC TTTGCGGCGC AGACGCACGT CGACAACTCC TTCGGAAATT CCTTCGCCTT
TACGCAGACC AACATTTACG GAACGCACGT CCTGCTCGAG TCCGCCAAGT GCTGTGACAC
CCTCCGTCGC TTCGTGCACG TCTCCACCGA CGAGGTCTAC GGAGAAGGAG AAGACTTTGA
AACGGACCCC ATGTCGGAAG AGCACGTCCT CGAACCGACC AATCCCTACG CCGCCACCAA
GGCCGGCGCC GAATTCCTCG TCAAGAGCTA CTTTCGTTCC TTCCAATTGC CCTGCTTGAT
CACCCGCGGT AACAACGTTT ACGGACCTCA CCAGTTCCCC GAAAAACTCA TTCCCAAGTT
CACCAACCAG TTGCTCAAGA ATCTGCCCCT CACCATTCAC GGTGACGGGT CCAACACACG
CAACTTTTTG TACGTGACGG ATGTCGCCAA CGCGTTCGAC ATCATCATGC ACAAGGGAAC
ACCGGGGCAC GTATACAACA TTGGGGGGAA GAATGAAGTG CCCAACCTGG AAGTGGCCCG
TGCCTTGCTC AAGCTCTTTG ACAAAGAAAA GGAGGAAGAT ACGCTCATTA AGTTCGTCCC
GGACCGACGA TTCAACGATC TACGGTACAC CATTAATTCC AACAAGTTGC ACGAGCTCGG
GTGGACGGAG CTCATGAGTT GGGAAGAAGG CCTCGCCACT ACGGTCGATT GGTACAAAAA
GTATACCTCC CGTTACGGCA ACATTGACGC GGCCCTCGTG GCGCATCCGC GCATGCTCAA
CACCAACAAG GAGGACTTGG ACGAATCTAC CCAAAAGGTC ATTATGAAGC AGCACAAGAA
CTAA
|
|---|
| Protein sequence | MSSVWGVDLP GGARLRPSQP HYAQETEKAR RRDRHSLGTT PLAVHNPADQ RVSTHPLRKF
CTMVETNGTK PTAPVEDYTP ENILVTGGAG FIASHVAILL CKKYPQYKIV VYDCLDYCAC
LANLQELFDL PNFKFVKGDI ASPDLVSYVL REEKIDTILH FAAQTHVDNS FGNSFAFTQT
NIYGTHVLLE SAKCCDTLRR FVHVSTDEVY GEGEDFETDP MSEEHVLEPT NPYAATKAGA
EFLVKSYFRS FQLPCLITRG NNVYGPHQFP EKLIPKFTNQ LLKNLPLTIH GDGSNTRNFL
YVTDVANAFD IIMHKGTPGH VYNIGGKNEV PNLEVARALL KLFDKEKEED TLIKFVPDRR
FNDLRYTINS NKLHELGWTE LMSWEEGLAT TVDWYKKYTS RYGNIDAALV AHPRMLNTNK
EDLDESTQKV IMKQHKN
|
|---|
| |