Gene PHATRDRAFT_47141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47141 
Symbol 
ID7201934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp590584 
End bp591907 
Gene Length1324 bp 
Protein Length396 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181232 
Protein GI219121769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.303382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCA AAACATTCGC TCTAGTGGTG ATCTGTCTCG CCTGGGCTCT CCACCGCTAC 
GTTCGCATTC CTCGCTCGCT GGAATGGCGT CCGTCGCCCC CGAGCGACTC GGCCACGATG
AAGGCCGTGC TCTACACCGA ACACGGCGAC ACTTCTGTCT TGCGAGTACA TCAAGACGCA
CCGCAGCCGC AACTCCAACC CCACCAGATA CTCGTGCACG TCTACGCCTC CTCCATAAAC
CCCTGTGACT ACAAAAACCG TCGCAACGAG GTTCCGTCAT GGGTTGTCCC GAAACCCAAG
ATCCCCGGCG CGGACGTGGC CGGTGTGGTG GTGGCCGTGG GTTCCGGAGT CGACGTCGAA
CGCGTGCGTC CGTTCCGAGT CGGAGACCGC GTCGCTGCCA TGTTGCCGCT CCTTCATTCC
CGCTGGGGGG CGGCCGCATC GTACGTCGCC GTCGACGCCA ATCTCGTGGC CCACGTCGGA
CCCAGAGTAT CCTTACGGGA TGCCGCGGCT CTACCCTTGG TCGCACTCAC CACACTGCAA
GCCCTGGAAT CCGTCACTGT CTCGCAATCA CCGACGGAGG CCCCACGAAA ACGCACTATT
CTCGTCCAAG CCGGAGCGGG TGGGGTCGGA TCGTTCGCGA TCCAGTATGC CAAACACGTT
TTGCAAATGC GCGTGATTGC CACAGCGTCA TCGGAAAAGG CCGAATTTCT CCGTAGTATC
GGCTGTGATC AGGTGGTGGA CTACCGGAAC GAGCCGTTTG AAGAGGTGGT ACACAACGTC
GATGTGGTGC TGGATCCCGT CAGTTGGTTG TACGAAGACC GAACTTTGGC GAGCGAGGTG
CTCCGACCCG GTGGCCATTA TTTAAACATT GTAGGCTCGG ACTGGGCCTT TTCTGGAACG
GAACAAGGCA ACGGGCCACG ATCACTTTGG AACTGGATCA AAGCGAAAAC CTTTGGACCG
TTCAAATACA GCTTCGTGGT GGTGGAACCG AACGGTATAC AGCTGCAAGC CGTCATGGAC
TTGCTCGAAA GCGCCACCAT TCGGGCCGTT GTGGACCGAA CCTTTGCTCT AGACGATGTT
CGAGAAGCGT ACGAGTATCT CGAGAAAGGC CACGCCACTG GAAAGGTGGT TCTCGTGCAC
GAAAAGGAAG AAGTGGAATC CGGTTCTGCG ACTGTTGCAG AAGAAAGTTA AGGACAATGC
GCAGCTATAA TCTGCAGATT TGGCGTTGCA GCTACGCTAT TAGGACTGGT TTTCACGCAA
CTTGCAACAT TTATGACGAG GCTATGGAAA GTGCTTGATA TCCTGCACTA TATTTCACCA
TGCT
 
Protein sequence
MTAKTFALVV ICLAWALHRY VRIPRSLEWR PSPPSDSATM KAVLYTEHGD TSVLRVHQDA 
PQPQLQPHQI LVHVYASSIN PCDYKNRRNE VPSWVVPKPK IPGADVAGVV VAVGSGVDVE
RVRPFRVGDR VAAMLPLLHS RWGAAASYVA VDANLVAHVG PRVSLRDAAA LPLVALTTLQ
ALESVTVSQS PTEAPRKRTI LVQAGAGGVG SFAIQYAKHV LQMRVIATAS SEKAEFLRSI
GCDQVVDYRN EPFEEVVHNV DVVLDPVSWL YEDRTLASEV LRPGGHYLNI VGSDWAFSGT
EQGNGPRSLW NWIKAKTFGP FKYSFVVVEP NGIQLQAVMD LLESATIRAV VDRTFALDDV
REAYEYLEKG HATGKVVLVH EKEEVESGSA TVAEES