Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47141 |
Symbol | |
ID | 7201934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 590584 |
End bp | 591907 |
Gene Length | 1324 bp |
Protein Length | 396 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181232 |
Protein GI | 219121769 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.303382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCCA AAACATTCGC TCTAGTGGTG ATCTGTCTCG CCTGGGCTCT CCACCGCTAC GTTCGCATTC CTCGCTCGCT GGAATGGCGT CCGTCGCCCC CGAGCGACTC GGCCACGATG AAGGCCGTGC TCTACACCGA ACACGGCGAC ACTTCTGTCT TGCGAGTACA TCAAGACGCA CCGCAGCCGC AACTCCAACC CCACCAGATA CTCGTGCACG TCTACGCCTC CTCCATAAAC CCCTGTGACT ACAAAAACCG TCGCAACGAG GTTCCGTCAT GGGTTGTCCC GAAACCCAAG ATCCCCGGCG CGGACGTGGC CGGTGTGGTG GTGGCCGTGG GTTCCGGAGT CGACGTCGAA CGCGTGCGTC CGTTCCGAGT CGGAGACCGC GTCGCTGCCA TGTTGCCGCT CCTTCATTCC CGCTGGGGGG CGGCCGCATC GTACGTCGCC GTCGACGCCA ATCTCGTGGC CCACGTCGGA CCCAGAGTAT CCTTACGGGA TGCCGCGGCT CTACCCTTGG TCGCACTCAC CACACTGCAA GCCCTGGAAT CCGTCACTGT CTCGCAATCA CCGACGGAGG CCCCACGAAA ACGCACTATT CTCGTCCAAG CCGGAGCGGG TGGGGTCGGA TCGTTCGCGA TCCAGTATGC CAAACACGTT TTGCAAATGC GCGTGATTGC CACAGCGTCA TCGGAAAAGG CCGAATTTCT CCGTAGTATC GGCTGTGATC AGGTGGTGGA CTACCGGAAC GAGCCGTTTG AAGAGGTGGT ACACAACGTC GATGTGGTGC TGGATCCCGT CAGTTGGTTG TACGAAGACC GAACTTTGGC GAGCGAGGTG CTCCGACCCG GTGGCCATTA TTTAAACATT GTAGGCTCGG ACTGGGCCTT TTCTGGAACG GAACAAGGCA ACGGGCCACG ATCACTTTGG AACTGGATCA AAGCGAAAAC CTTTGGACCG TTCAAATACA GCTTCGTGGT GGTGGAACCG AACGGTATAC AGCTGCAAGC CGTCATGGAC TTGCTCGAAA GCGCCACCAT TCGGGCCGTT GTGGACCGAA CCTTTGCTCT AGACGATGTT CGAGAAGCGT ACGAGTATCT CGAGAAAGGC CACGCCACTG GAAAGGTGGT TCTCGTGCAC GAAAAGGAAG AAGTGGAATC CGGTTCTGCG ACTGTTGCAG AAGAAAGTTA AGGACAATGC GCAGCTATAA TCTGCAGATT TGGCGTTGCA GCTACGCTAT TAGGACTGGT TTTCACGCAA CTTGCAACAT TTATGACGAG GCTATGGAAA GTGCTTGATA TCCTGCACTA TATTTCACCA TGCT
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Protein sequence | MTAKTFALVV ICLAWALHRY VRIPRSLEWR PSPPSDSATM KAVLYTEHGD TSVLRVHQDA PQPQLQPHQI LVHVYASSIN PCDYKNRRNE VPSWVVPKPK IPGADVAGVV VAVGSGVDVE RVRPFRVGDR VAAMLPLLHS RWGAAASYVA VDANLVAHVG PRVSLRDAAA LPLVALTTLQ ALESVTVSQS PTEAPRKRTI LVQAGAGGVG SFAIQYAKHV LQMRVIATAS SEKAEFLRSI GCDQVVDYRN EPFEEVVHNV DVVLDPVSWL YEDRTLASEV LRPGGHYLNI VGSDWAFSGT EQGNGPRSLW NWIKAKTFGP FKYSFVVVEP NGIQLQAVMD LLESATIRAV VDRTFALDDV REAYEYLEKG HATGKVVLVH EKEEVESGSA TVAEES
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